IC4R Information Commons for Rice

IC4R-OSJ05G072800

Gene Summary

Gene Accession IC4R-OSJ05G072800
Symbol OsGA3ox1, GA3ox1, OsGA3OX1
ID Mapping LOC_Os05g08540,Os05g0178100
Gene Description Gibberellin 3-Beta-Dioxygenase 2-2
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 1927
Chromosome Chromosome 5
Location 4660662:4662589
Strand -
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0005515 Molecular Function protein binding
GO:0009740 Biological Process Gibberellic Acid Mediated Signaling Pathway
GO:0009686 Biological Process Gibberellin Biosynthetic Process
GO:0009416 Biological Process Response To Light Stimulus
GO:0046872 Molecular Function Metal Ion Binding
GO:0016707 Molecular Function Gibberellin 3-Beta-Dioxygenase Activity
GO:0016491 Molecular Function Oxidoreductase Activity
GO:0055114 Biological Process Oxidation-Reduction Process
GO:0016216 Molecular Function isopenicillin
GO:0017000 Biological Process antibiotic biosynthetic process
GO:0005737 Cellular Component cytoplasm
GO:0007165 Biological Process signal transduction
GO:0009628 Biological Process response to abiotic stimulus
GO:0006629 Biological Process lipid metabolic process
GO:0009987 Biological Process cellular process
GO:0009058 Biological Process biosynthetic process
GO:0008152 Biological Process metabolic process
GO:0009719 Biological Process response to endogenous stimulus
GO:0003824 Molecular Function catalytic activity
Plant Ontology
PO:1000518 Others seedling development stage
PO:0008037 Plant Anatomy seedling
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
4.605406 0.0 36.896927 0.0 2.204518 0.926663142 5
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments