IC4R Information Commons for Rice

IC4R-OSJ05G400900

Gene Summary

Gene Accession IC4R-OSJ05G400900
Symbol OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2
ID Mapping LOC_Os05g45720,Os05g0533600
Gene Description Starch Synthase
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 8305
Chromosome Chromosome 5
Location 26485807:26494112
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

[View in new window]

Ontologies

Gene Ontology
GO:0016740 Molecular Function transferase activity
GO:0005975 Biological Process carbohydrate metabolic process
GO:0009987 Biological Process cellular process
GO:0008152 Biological Process metabolic process
GO:0009536 Cellular Component plastid
GO:0005978 Biological Process glycogen biosynthetic process
GO:0004373 Molecular Function Glycogen (Starch) Synthase Activity
GO:0009501 Cellular Component Amyloplast
GO:0009507 Cellular Component Chloroplast
GO:0008137 Molecular Function Nadh Dehydrogenase (Ubiquinone) Activity
GO:0009011 Molecular Function Starch Synthase Activity
GO:0048038 Molecular Function Quinone Binding
GO:0051539 Molecular Function 4 Iron, 4 Sulfur Cluster Binding
GO:0019252 Biological Process Starch Biosynthetic Process
GO:0055114 Biological Process Oxidation-Reduction Process
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
13.022734 11.388387 26.634991 3.149977 0.466948 0.541129448 18
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments