IC4R Information Commons for Rice

IC4R-OSJ07G357000

Gene Summary

Gene Accession IC4R-OSJ07G357000
Symbol OsGH3-8, OsMGH3, OsGH3.8, GH3.8, OsGH3-2
ID Mapping LOC_Os07g40290,Os07g0592600
Gene Description Osgh3.8 - Probable Indole-3-Acetic Acid-Amido Synthetase
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 2641
Chromosome Chromosome 7
Location 24149483:24152124
Strand -
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:0009416 Biological Process response to light stimulus
GO:0010279 Molecular Function indole
GO:0016874 Molecular Function ligase activity
GO:0008150 Biological Process Biological Process
GO:0008152 Biological Process metabolic process
GO:0009719 Biological Process response to endogenous stimulus
GO:0009733 Biological Process response to auxin stimulus
GO:0003824 Molecular Function catalytic activity
Plant Ontology
PO:0007098 Plant Structure Development Stage LP.02 two leaves visible
PO:1000518 Others seedling development stage
PO:0000003 Plant Anatomy whole plant
PO:0005052 Plant Anatomy plant callus
PO:0009005 Plant Anatomy root
PO:0009006 Plant Anatomy shoot system
PO:0009046 Plant Anatomy flower
PO:0025034 Plant Anatomy leaf
PO:0025287 Plant Anatomy seedling coleoptile
PO:1000058 Others etiolated seedling
PO:1000527 Others etiolated shoot
Environment Ontology
EO:1000103 Others fluridone
EO:0007270 Others continuous dark (no light) regimen
EO:0007180 Others 2,4-dichlorophenoxyacetic acid
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
19.787565 8.116194 98.890045 0.0 1.399097 0.846956509 17
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments