IC4R Information Commons for Rice

IC4R-OSJ08G393100

Gene Summary

Gene Accession IC4R-OSJ08G393100
Symbol OsCERK1, CERK1, OsLysM-RLK9, Os-CERK1, Os-LysM-RLK9, OsLysMRLK9
ID Mapping LOC_Os08g42580,Os08g0538300
Gene Description Chitin Elicitor Receptor Kinase 1
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 5080
Chromosome Chromosome 8
Location 26908778:26913858
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

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Ontologies

Gene Ontology
GO:2001080 Molecular Function Chitosan Binding
GO:0016021 Cellular Component Integral Component Of Membrane
GO:0004674 Molecular Function Protein Serine/Threonine Kinase Activity
GO:0008061 Molecular Function Chitin Binding
GO:0043621 Molecular Function Protein Self-Association
GO:0010200 Biological Process Response To Chitin
GO:0045087 Biological Process Innate Immune Response
GO:0005622 Cellular Component Intracellular
GO:0042803 Molecular Function Protein Homodimerization Activity
GO:0004672 Molecular Function Protein Kinase Activity
GO:0002752 Biological Process Cell Surface Pattern Recognition Receptor Signaling Pathway
GO:0009817 Biological Process Defense Response To Fungus, Incompatible Interaction
GO:0032499 Biological Process Detection Of Peptidoglycan
GO:0035556 Biological Process Intracellular Signal Transduction
GO:0042742 Biological Process Defense Response To Bacterium
GO:0046777 Biological Process Protein Autophosphorylation
GO:0071219 Biological Process Cellular Response To Molecule Of Bacterial Origin
GO:0071323 Biological Process Cellular Response To Chitin
GO:0008150 Biological Process Biological Process
GO:0004872 Molecular Function receptor activity
GO:0004871 Molecular Function signal transducer activity
GO:0009607 Biological Process response to biotic stimulus
GO:0006950 Biological Process response to stress
GO:0008152 Biological Process metabolic process
GO:0009987 Biological Process cellular process
GO:0006464 Biological Process protein modification process
GO:0007165 Biological Process signal transduction
GO:0016301 Molecular Function kinase activity
GO:0005886 Cellular Component plasma membrane
GO:0045089 Biological Process positive regulation of innate immune response
GO:0052064 Biological Process induction by symbiont of defense
GO:0032494 Biological Process response to peptidoglycan
GO:0032491 Biological Process detection of molecule of fungal origin
GO:0019199 Molecular Function transmembrane receptor protein kinase activity
GO:0006468 Biological Process Protein Phosphorylation
GO:0005524 Molecular Function Atp Binding
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
27.762879 29.134767 56.581461 0.0 0.49885 0.539289588 17
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments