IC4R Information Commons for Rice

IC4R-OSJ12G151500

Gene Summary

Gene Accession IC4R-OSJ12G151500
Symbol ogr1
ID Mapping LOC_Os12g17080,Os12g0270200
Gene Description Pentatricopeptide
Organism Oryza sativa Japonica Group
Type Protein-coding Gene
Length (bp) 4934
Chromosome Chromosome 12
Location 9777623:9782557
Strand +
Additional Links MSU; RAP-DB;

Genome Browser

[View in new window]

Ontologies

Gene Ontology
GO:0008150 Biological Process Biological Process
GO:0009451 Biological Process RNA modification
GO:0008270 Molecular Function Zinc Ion Binding
GO:0005739 Cellular Component Mitochondrion
GO:0003723 Molecular Function Rna Binding
GO:0004519 Molecular Function Endonuclease Activity
GO:0051536 Molecular Function Iron-Sulfur Cluster Binding
GO:0006397 Biological Process Mrna Processing
GO:0009228 Biological Process Thiamine Biosynthetic Process
GO:0080156 Biological Process Mitochondrial Mrna Modification
GO:0090305 Biological Process Nucleic Acid Phosphodiester Bond Hydrolysis
Plant Ontology
No related terms.
Environment Ontology
No related terms.
Trait Ontology
No related terms.

Functional Annotation

Transcripts

RNA-Seq Evidence

Expression Profiles

Average (TPM) Median (TPM) Maximum (TPM) Minimum (TPM) CV τ-Value Tissues Breadth
6.300768 5.349955 16.638777 0.0 0.634649 0.657868538 17
TPM: Transcripts Per Million; CV: Coefficient of Variance; τ-Value: Tissue Specificity Index

Community Curation & Comments