IC4R Information Commons for Rice

Gene Annotation in IC4R 1.0

Gene Accession Os01g0188400
Location Chr1:4739271-4744472 (-)
Synonym ME6;Os01g0188400;LOC_Os01g09320;P0512G09.20;P0695A04.29;OsJ_00690;IC4R-OSJ01G079300
Organism Ehrhartoideae / Oryzeae /Oryza
Length (bp) 5202
IC4R Links Expression; Variation; Literature; RiceWiki ; IC4R 2.0
Sequence [Download] [View]
Accession Length Location GC content Purine content Sequence

Methylation profile

[View in new window]

QTL/Gene -
Major category Morphological trait
Category of object character Root
Character Root axis length
Marker SSR
No of marker for position determination 1
Location Chr1: 3484439-10053455
Mapping method C)Interval
Population BC1F5
No of plants 106
LOD 3.74
Parent A Akihikari
Parent B IRAT109
Direction ( Parent ) B
Explained variance 16
Additive effect 0.98
Year 2006