IC4R Information Commons for Rice

Gene Annotation in IC4R 1.0

Gene Accession Os04g0615700
Location Chr4:31239185-31243430 (+)
Synonym AGO2;Os04g0615700;LOC_Os04g52540;OSJNBa0008M17.11;IC4R-OSJ04G462800
Organism Ehrhartoideae / Oryzeae /Oryza
Length (bp) 4246
IC4R Links Expression; Variation; Literature; RiceWiki ; IC4R 2.0
Sequence [Download] [View]
Accession Length Location GC content Purine content Sequence
Os02t0832600-02 1053 Chr2:35805016-35806540 (+) 62.11 49.86 [Download] [View]
Os02t0832600-01 1053 Chr2:35804950-35806316 (+) 62.11 49.86 [Download] [View]

Methylation profile

[View in new window]

QTL/Gene -
Major category Physiological trait
Category of object character Source activity
Character chlorophyll content
Marker RFLP
No of marker for position determination 1
Location Chr4: 31038332-33440993
Mapping method C)Interval
Population F2
No of plants 231
LOD 2.91
Parent A IR42
Parent B Palawan
Direction ( Parent ) B
Explained variance 5.9
Additive effect 0.134
Year 1996