IC4R Information Commons for Rice

Gene Annotation in IC4R 1.0

Gene Accession Os05g0522500
Location Chr5:26017332-26022265 (+)
Synonym HXK5;Os05g0522500;LOC_Os05g44760;OJ1087_C03.12;OSJNBa0075A10.5;OsJ_19253;IC4R-OSJ05G391300
Organism Ehrhartoideae / Oryzeae /Oryza
Length (bp) 4934
IC4R Links Expression; Variation; Literature; RiceWiki ; IC4R 2.0
Sequence [Download] [View]
Accession Length Location GC content Purine content Sequence
Os11t0513700-01 1227 Chr11:18372832-18378851 (-) 39.85 55.99 [Download] [View]

Methylation profile

[View in new window]

QTL/Gene qRFC-5
Major category Physiological trait
Category of object character Eating quality
Character Rice fat content
Marker RFLP
No of marker for position determination 2
Location Chr5: 24933983-27174269
Mapping method C)Interval
Population DHL
No of plants 81
LOD 6.6
Parent A Gui630
Parent B 2428
Direction ( Parent ) A
Explained variance 25.5
Additive effect -0.17
Year 2004