Gene Annotation in IC4R 1.0

Gene Accession Os06g0157500
Location Chr6:2926823-2928474 (+)
Synonym HD3B;RFT1;Os06g0157500;LOC_Os06g06300;OsJ_20189;P0046E09.26;P0702F05.6;IC4R-OSJ06G050800
Organism Ehrhartoideae / Oryzeae /Oryza
Length (bp) 1652
IC4R Links Expression; Variation; Literature; RiceWiki ; IC4R 2.0
Sequence [Download] [View]
Accession Length Location GC content Purine content Sequence
Os04t0108600-00 420 Chr4:521286-521708 (+) 48.81 52.38 [Download] [View]

Methylation profile

QTL/Gene alk6-1
Major category Physiological trait
Category of object character Eating quality
Character Alkali-spread.score
Marker SSR
No of marker for position determination 2
Location Chr6: 1765585-5426601
Mapping method C)Interval
Population DH from BC3F1
No of plants 312
LOD 32.5
Parent A Caiapo
Parent B Oryza glaberrima (accession IRGC No. 103544)
Direction ( Parent ) -
Explained variance 50.1
Additive effect 0.87
Year 2004