LncRNA - LncRNAWiki - CNCB-NGDC

LncRNAWiki 2.0 Community curation of long non-coding RNAs

Basic Information

Report

Symbol	CASC15
Synonyms	LINC00340,lnc-SOX4-1
Gene ID	HSALNG0048533
Gene Locus	6p22.3
Transcript ID	Show all transcript ID HSALNT0102398 HSALNT0102400 HSALNT0102402 HSALNT0102403 HSALNT0102404 HSALNT0102405 HSALNT0102407 HSALNT0102408 HSALNT0102409 HSALNT0102410 HSALNT0102411 HSALNT0102412 HSALNT0102413 HSALNT0102414 HSALNT0102415 HSALNT0102420 HSALNT0102424 HSALNT0102425 HSALNT0102426 HSALNT0102427 HSALNT0102428 HSALNT0102429 HSALNT0102430 HSALNT0102431 HSALNT0102432 HSALNT0102433 HSALNT0102434 HSALNT0102435 HSALNT0102436 HSALNT0102437 HSALNT0102438 HSALNT0102439 HSALNT0102441 HSALNT0102442 HSALNT0102444 HSALNT0102448 HSALNT0102449 HSALNT0102451 HSALNT0102455 HSALNT0102456 HSALNT0102461 HSALNT0102465 HSALNT0102466 HSALNT0102467 HSALNT0102468 HSALNT0102470 HSALNT0102471 HSALNT0102473 HSALNT0102481 HSALNT0102484 HSALNT0102485 HSALNT0102486 HSALNT0102487 HSALNT0102488 HSALNT0102489 HSALNT0102490 HSALNT0102491 HSALNT0102492 HSALNT0102499 HSALNT0102500 HSALNT0102503 HSALNT0102504 HSALNT0102505 HSALNT0102506 HSALNT0102507 HSALNT0288905 HSALNT0333025 HSALNT0333026 HSALNT0333027 HSALNT0333028 HSALNT0333029 HSALNT0333030 HSALNT0333031 HSALNT0333032 HSALNT0333033 HSALNT0333034 HSALNT0333035 HSALNT0333036 HSALNT0333037 HSALNT0333038 HSALNT0333039 HSALNT0333040 HSALNT0333041 HSALNT0333042 HSALNT0333043 HSALNT0333044 HSALNT0333045 HSALNT0333046 HSALNT0333047 HSALNT0333048 HSALNT0333049 HSALNT0333050 HSALNT0333051 HSALNT0333052 HSALNT0333053 HSALNT0333054 HSALNT0333055 HSALNT0333056 HSALNT0333057 HSALNT0333058 HSALNT0333059 HSALNT0333060 HSALNT0333061 HSALNT0333062 HSALNT0333063 HSALNT0333064 HSALNT0333065 HSALNT0333066 HSALNT0333067 HSALNT0333068 HSALNT0333069 HSALNT0333070 HSALNT0333071 HSALNT0333072 HSALNT0333073 HSALNT0333074 HSALNT0333075 HSALNT0333076 HSALNT0333077 HSALNT0333078 HSALNT0333079 HSALNT0333080 HSALNT0333081 HSALNT0333082 HSALNT0333083 HSALNT0333084 HSALNT0333085 HSALNT0333086 HSALNT0333087 HSALNT0333088 HSALNT0333089 HSALNT0333090 HSALNT0333091 HSALNT0333092 HSALNT0333093 HSALNT0333094 HSALNT0333095 HSALNT0333096 HSALNT0333097 HSALNT0333098 HSALNT0333099 HSALNT0333100 HSALNT0333101 HSALNT0333102 HSALNT0333103 HSALNT0333104 HSALNT0333105 HSALNT0333106 HSALNT0333107 HSALNT0333108 HSALNT0333109 HSALNT0333110 HSALNT0333111 HSALNT0333112 HSALNT0333113 HSALNT0333114 HSALNT0333115 HSALNT0333116 HSALNT0333117 HSALNT0333118 HSALNT0333119 HSALNT0333120 HSALNT0333121 HSALNT0333122 HSALNT0333123 HSALNT0333124 HSALNT0333125 HSALNT0333126 HSALNT0333127 HSALNT0333128 HSALNT0333129 HSALNT0333130 HSALNT0333131 HSALNT0333132 HSALNT0333133 HSALNT0333134 HSALNT0333135 HSALNT0333136 HSALNT0333137 HSALNT0333138 HSALNT0333139 HSALNT0333140 HSALNT0333141 HSALNT0333142 HSALNT0333143 HSALNT0333144 HSALNT0333145 HSALNT0333146 HSALNT0333147 HSALNT0333148 HSALNT0333149 HSALNT0333151 HSALNT0333152 HSALNT0333165 HSALNT0333166 HSALNT0333167 HSALNT0333168 HSALNT0333169 HSALNT0333170 HSALNT0333171 HSALNT0333172 HSALNT0333173 HSALNT0333177 HSALNT0333180 HSALNT0333181 HSALNT0333182 HSALNT0333183 HSALNT0333184 HSALNT0333185
Conservation	NA

Publication

Context

Sample

Disease

Signature

Interaction

Drug

sgRNA

Function

Conservation

Biological Context

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Table

Biological Context	Context Detail	Entry Count

Experimental Sample

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Table

Tissue/Cell Line	Entry Count

Drugs

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Table

Drug	Biological Context	Context Detail	PMID
Drug	Biological Context	Context Detail

Interacting Partner

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Target
Regulator

Regulator Type	Regulator	Regulator Effect	Biological Context	Context Detail	PMID
Regulator Type	Regulator	Regulator Effect	Biological Context	Context Detail

Target Type	Target	Target Effect	Biological Context	Context Detail	PMID
Target Type	Target	Target Effect	Biological Context	Context Detail

Molecular Signature

Report

Genome Variation	Variation Detail	Biological Context	Context Detail	PMID
Genome Variation		Biological Context	Context Detail

Epigenetic Modification	Modification Detail	Biological Context	Context Detail	PMID
Epigenetic Modification		Biological Context	Context Detail

Expression	Expression Detail	Biological Context	Context Detail	PMID
Expression	Expression Detail	Biological Context	Context Detail

Biological Function

Report

Biological Process	Molecular Function	Pathway	Functional Mechanism	Biological Context	Context Detail	PMID
				Biological Context	Context Detail

Table

Table

Table

Table

Table

Table

Table

Table

CRISPR Design

Report

sgRNA ID	sgRNA Sequence	sgRNA Position	sgRNA Pam	Length of sgRNA	sgRNA Type	sgRNA Validity	Cell Line	Note	PMID

Sequence

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search by accession id or nucleotide sequence

Transcript ID	Sequence

Curation History

Curated by:

Wei Jing(Mon Jul 04 16:32:13 CST 2022)

Reviewed by:

Wei Jing(Mon Jul 04 16:32:13 CST 2022)