LncRNAWiki 2.0 Community curation of long non-coding RNAs
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  • FGD5-AS1

    • Basic Information

    Symbol   FGD5-AS1
    Synonyms NA
    Gene ID   HSALNG0024362
    Gene Locus 3p25.1
    Transcript ID Show all transcript ID
    Conservation NA
    Publication
    10
    Context
    2
    Sample
    28
    Disease
    4
    Signature
    1
    Interaction
    2
    Drug
    0
    sgRNA
    0
    Function
    2
    Conservation
    0

    Biological Context

    Created with Highcharts 9.1.0Disease​DiseaseHepatocellular carcinomaHepatoc…​Hepatocellular carcinomaHepatoc…Subcellular LocalizationSubcellular Loca…​Subcellular LocalizationSubcellular Loca…nucleoplasmnucleopl…​nucleoplasmnucleopl…nucleus​nucleuscytoplasm​cytoplasmcytosol​cytosolneuroblastomaneurobla…​neuroblastomaneurobla…Intracerebral hemorrhageIntracer…​Intracerebral hemorrhageIntracer…exosome​exosomeoral squamous cell canceroral squ…​oral squamous cell canceroral squ…colorectal cancercolorect…​colorectal cancercolorect…OsteoporosisOsteopo…​OsteoporosisOsteopo…pancreatic cancerpancreat…​pancreatic cancerpancreat…nucleus/cytoplasmnucleus/…​nucleus/cytoplasmnucleus/…non-small cell lung cancernon-sma…​non-small cell lung cancernon-sma…

    Table

    Biological Context Context Detail Entry Count

    Experimental Sample

    Created with Highcharts 9.1.0Hepg2K562Colon carcinoma cellLs174 tptercateninNhekHelas3Gm12878HuvecBloodPancreasHPDE6-C7PANC-1BXPC-3CAPAN-1SW1990BrainLiverBone MarrowSw480Hct116Sw620The normal hcoepicHt29LovoNcih1869Imr90H1703Nsclc tissueNcih1793Oscc tissueOscc hsc4Cal27Oral keratinocyte(hokScc9Scc25Hek293Hela

    Table

    Tissue/Cell Line Entry Count

    Drugs

    Table

    Drug Biological Context Context Detail PMID
    Drug Biological Context Context Detail

    Interacting Partner

    CopyCSV
    Regulator TypeRegulatorRegulator EffectBiological ContextContext DetailPMID
    ProteinELAVL1NA21723170
    Showing 1 to 1 of 1 entries
    CopyCSV
    Target TypeTargetTarget EffectBiological ContextContext DetailPMID
    miRNAmiR-106a-3pNA25531890
    miRNAmiR-577InhibitDiseasepancreatic cancer34821374
    miRNAmiR-6838-5pInhibitDiseaseIntracerebral hemorrhage34902342
    miRNAmiR-873-5pInhibitDiseaseHepatocellular carcinoma34783233
    miRNAmiR-506-3pInhibitDiseaseOsteoporosis34772438
    Showing 1 to 5 of 5 entries

    Molecular Signature

    Genome Variation Variation Detail Biological Context Context Detail PMID
    Genome Variation Biological Context Context Detail
    Epigenetic Modification Modification Detail Biological Context Context Detail PMID
    Epigenetic Modification Biological Context Context Detail
    Expression Expression Detail Biological Context Context Detail PMID
    Expression Expression Detail Biological Context Context Detail

    Biological Function

    Biological Process Molecular Function Pathway Functional Mechanism Biological Context Context Detail PMID
    Biological Context Context Detail

    Table

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    GO ID
    Term
    Gene Ratio
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    Count
    Gene Symbol
    No matching records found

    Table

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    KEGG ID
    Term
    Gene Ratio
    Adjust p-value
    Count
    Entrez ID
    No matching records found

    Table

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    GO ID
    Term
    Gene Ratio
    Adjusted p-value
    Count
    Gene Symbol
    No matching records found

    Table

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    KEGG ID
    Term
    Gene Ratio
    Adjusted p-value
    Count
    Entrez ID
    No matching records found

    CRISPR Design

    sgRNA ID sgRNA Sequence sgRNA Position sgRNA Pam Length of sgRNA sgRNA Type sgRNA Validity Cell Line Note PMID

    Sequence

    search by accession id or nucleotide sequence
    Transcript ID Sequence

    Curation History

    Curated by:

    Luo Sicheng(Mon Mar 28 20:29:55 CST 2022)
    Wei Jing(Mon Jul 04 09:31:18 CST 2022)
    Wei Jing(Wed Jul 13 14:15:31 CST 2022)
    Wei Jing(Wed Jul 13 16:36:28 CST 2022)

    Reviewed by:

    Luo Sicheng(Mon Mar 28 20:29:55 CST 2022)
    Wei Jing(Mon Jul 04 09:31:18 CST 2022)
    Wei Jing(Wed Jul 13 14:15:31 CST 2022)
    Wei Jing(Wed Jul 13 16:36:28 CST 2022)