ENST00000295549.4
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000295549.4 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1407 nt |
Genomic location |
chr2-:177494317..177502659 |
Exon number |
3 |
Exons |
177494317..177495160,177497761..177497853,177502190..177502659 |
Genome context |
|
Sequence |
000001 GCGAGCCACG GGCCTCGCTG CGGGTTCAAG TGCGTCCGGG TTTGGACGTC GCGGCTCCAG GAGTGTGCTC TCTCTCCTGC 000080
000081 CCATCCCCTC CCCGGAGTTC AGCGCATCCG GGGCCCCGGG GACCCCTCTT CCCGGCCCTC CTGGCCGCGC TGGCCCGCCC 000160 000161 GCATGGGGCC GAGGTTCCTG GCCGACGCGC GAGGGCGCGG GCGGGTACCG GGTTCCCGTT TTTCCCAGGC CCCGATCCCC 000240 000241 GCCCACGCAC GAGGCCCCCG GCCCACGCAC GAGGCGCCCA CGCCCATCGT GGAGGCTCCG CCTGGAAAAG AAGTCCGACT 000320 000321 TCCTCTCCAA GCTGCTCCGA GGGGAATGGG GAATCGGCAG GAAATGACCC GAACTGCCAG CCTGCGCCTT TGCAGCCGGC 000400 000401 CCTCGCTTTG CTGAAGACGA GCAGCTCCCA CCAAAGTCTT GCCTCCCCTT ACCCCGAAAG CCCCGCTCAG TTCAATATTT 000480 000481 CAAGTGAAAA TCTGCCTGTT CGAAAATAAA ATATTCACAA ATGAGCAGTG TATTAGAAGA CAACTGAATT GCTTCTAAGA 000560 000561 ATGGGTCTCA CTCTGCCATC ACCCAGGCTG GAGTGTGGTG GCACCATCAT GGCTCACTGC AGCCTTGAAC TCCTGAGCTC 000640 000641 AAGTCATCCT CCCACCTCAG CCTTCCGAGT AGCTGGAACT GCAGGTGTGA GCCACCATGC CTGGCTGATT TGTCTTTTTA 000720 000721 AATTTTTTAT AGAGACCGAG TCTCAACTAT ATTGTCCAGG CTGGAAAAGA ACTTCTTTCC CTCCAAGTGA TAACCTTTTC 000800 000801 CAGACAAGTC AGCTTAAAAA CTGACCCAAA GGCCCTGAAG TACACAGTTT TCTTGGAGAA AGAAAAAAAT AAGTGAAAAG 000880 000881 GACTTGCTGA CTTGCTAATT CATTTTGGGG CCTGTGGGTA ACATCAGAAT GGCAAAGCAC TTGGGGCTTT TTTCTAATTT 000960 000961 GTATTTTTTT AATCTTCTGA GAAATGACTT TTATATGCCA AGATTCATTC CATGATTAGT TTTTATGACC AAGTTATGAA 001040 001041 CGCTTTTGAA TATGGGGACC TAGAATAGAA ATGCTAACCT ACCTGCAAGG AGAGCTCTGT GATTGGCATC CCCATCATGC 001120 001121 TGTAACTGAC ACAAAATAAA CTTAGGGTAA TTGCCGCATA GTGTAACTTT AATGTGTGAG CATACTGTAA CATCTGACAA 001200 001201 GCTTCTTGAT CTAGATCAGC AATGTGTAAC CCATTCATTG TTGTCACTCT CAACAAGGCC TTATGGTCAA ACATCATCAC 001280 001281 TCTCACTAAA GAGATAGTTT ACTGAAATAT ACTGAGATTT TGAAACTGGA GTCAAGAGGT AGCACACTGT TTTATGTTGA 001360 001361 TCCATTTAAT GGTCCTTGAC AGCCAATAAA AAGACACTGG AAGAATA |
Predicted Small Protein
Name | ENST00000295549.4_smProtein_560:823 |
Length | 88 |
Molecular weight | 9582.9318 |
Aromaticity | 0.103448275862 |
Instability index | 58.6218390805 |
Isoelectric point | 7.73394775391 |
Runs | 12 |
Runs residual | 0.000328407224959 |
Runs probability | 0.0363010068892 |
Amino acid sequence | MGLTLPSPRLECGGTIMAHCSLELLSSSHPPTSAFRVAGTAGVSHHAWLICLFKFFIETE SQLYCPGWKRTSFPPSDNLFQTSQLKN |
Secondary structure | LLLLLLLLLLLLLLEEEEEEEEHHHLLLLLLLLLEEELLLLLHHHHHHHHHHHHHHHHLL LLEELLLLEELLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL LLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii iiiiiiiiiiiiiiiiiiiiiiiiiii |