ENST00000313064.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000313064.2 |
Source |
Gencode19 |
Same with |
lnc-NMUR1-1:1,NONHSAT077373 |
Classification |
intergenic |
Length |
1282 nt |
Genomic location |
chr2-:232373137..232379050 |
Exon number |
3 |
Exons |
232373137..232374054,232378238..232378343,232378793..232379050 |
Genome context |
|
Sequence |
000001 GAGGGCGTCA CCAGCGTGTC GGCGCCTGCG GTTTTCTTCG GGCTGTCCCC AGGCGTCGTG CCCGCGTCCG TCACGCGCGG 000080
000081 TGGCTTGCAG GGGCGCACCG CGACAGCCTT AAAGGAAAAC CTGTTAGGGA CAAGGGCTGC TGTGGGCAGC GAGGGTTATA 000160 000161 GACTCATGTG TGTTCTGAAT TCTGGTGGGG GTAGTGATGG ACGCTGACCC AGTTCACAGA ATTATCTGAC TGGCGAAGTA 000240 000241 AAGGTACTTG AATTGCAGGA AAAAAGGTCA AGGTGAACTG AAGAAAATAA GTCTTTCCCC AAAGGAGGTA GAAGATGGGG 000320 000321 AAGATGAGAT GTCAGAAGCT AAGGACAATG GCAGTAGAGA TGAGGTTCTT GTCCCTCATA AGAATTGCAG GAAGAATACC 000400 000401 ACTGTCCCGG GAAAGAAAGG GGAGGAAAAG TCTCTGGCTC CTGTGTTTGC TGAGAAGTTA ATATCACCAA GCAGGAGGGG 000480 000481 AGCCAAGCTC AAGGACCGTG AGAGCCACCA GGAGAATGAA GACAGGAACA GTGAGTTGGA CCAGGATGAG GAAGATAAAG 000560 000561 AATCCTTCTG TAGGGGGTTC CCGATGAGTG GCTGTGAGTT AGAGACAAGC TGCTGTGTGT GCCATTCTAC AGCACTTGGG 000640 000641 GAGAGGTTCT GTTAAAAATC CATCCCTCTG AAAACTGCCT TGGCAATTCC CGGCTGATTC TTCGGGATGG GCCTCATTGA 000720 000721 TGGGGAGTCT CAGTGGATGT TTGACTTTTG CTTTCTACCT GACCCTAGTC AGAGATTTTT TCTTTTTCCT TTTTTTTTTT 000800 000801 TTTTTTTTTC TGAGACAGAG TCTTGCTCTG TCACCCAGGT TGGAGTGCAT TGGTGTGGTC TTGGCTCACT GCAGCCTCTG 000880 000881 CCTCCTGAGT AGCTGGGACT ACAGGCGCAC ACCACCACAC TGGCTAATTT TTGTATTTTT AGTAGAGATG GGGTTTCGCC 000960 000961 ATGTTGGCCA GGCCATCTTG AACTCCTGAC CTGAAGTGAC CTTCCCACCT TGGCCCCCCA AAGTGCTGGG ATTACAGGCA 001040 001041 TGAGCCACCA TGCCTAGCCC AGAAATTTTC TCTTTGAATA CTATACATTG ATGAGTTCTG TCTTTATGCT TATGATCCAC 001120 001121 GCAGGTAGGT CGTCTCAGAT TTAATTTTCA GTGGTTTTTT TCTGTCTTGA TGGAGTCTGT GTAACATTTA AAATATTGCT 001200 001201 ACCAAAGCAG TAATTCTTAC TATAGTTATT AAAATGCAAG AACAATATAT TTAAAATTAT TTCATAATAA AGTTAAAATG 001280 001281 AG |
Predicted Small Protein
Name | ENST00000313064.2_smProtein_719:988 |
Length | 90 |
Molecular weight | 10412.2722 |
Aromaticity | 0.213483146067 |
Instability index | 49.0574157303 |
Isoelectric point | 8.50823974609 |
Runs | 11 |
Runs residual | 0.0196078431373 |
Runs probability | 0.0468596939186 |
Amino acid sequence | MGSLSGCLTFAFYLTLVRDFFFFLFFFFFFLRQSLALSPRLECIGVVLAHCSLCLLSSWD YRRTPPHWLIFVFLVEMGFRHVGQAILNS |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEHHHHHHHHHHHLLLL LLLLLLLEEEEEEHHHHLHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLL LLLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiiii iiiiTTTTTTTTTTTTTTTTTTooooooo |