ENST00000316148.4
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000316148.4 |
Source |
Gencode19 |
Same with |
lnc-MORF4L1-2:1,NONHSAT047634 |
Classification |
antisense |
Length |
1900 nt |
Genomic location |
chr15+:79271231..79278268 |
Exon number |
2 |
Exons |
79271231..79271665,79276804..79278268 |
Genome context |
|
Sequence |
000001 GTGCTGCAGG GAGCAGGGGA ATGTGGGAGA GACACTTACA CGGGCCCACA GGCCACCTGA AAGAGGGAAG ACGGTCAGGG 000080
000081 TGGGGACTCA GACAGAATGG GGGGCCCCAG AGGCAGTGGA GGCAGCGGTG GTGGCGGCGG CAGACGAGGA AGCCAGCCAT 000160 000161 GTGAGGAGGT GGATGGAGTG GTGCCCCGGG GGCGGACGGA CGGACAAGTT GGTGAATGCA CGGAGGGGGC AGCTCCCCAC 000240 000241 AAGCACAGTC CACAGGGGCT CTCGGGAGCC CAGGCAGAAG AGAGACGGCT GGACAGCACA GATGGGTGCA ACATCTGTCT 000320 000321 GAGGACACAA ACAAAGTGGA GATGGTCAAG GCGATGGCAC ACAGAGCTGG CAAAGGACAG ACCAAATGCG GCAGGAAGAA 000400 000401 AACGCAAAGA GGAGGCAGAC GAGGCTGGCA GAGGGGTTCA TGTTCTGAGT GAAGAGGGAT TGAGCACACA TTTAAGGTGA 000480 000481 TCAACTAGCC AACACGTTCC AGGAAGCAGC TAACTCTCTG TGGCCAGAAG CGCAGGTGAA ATTAGAATCC TGGGAAGGGG 000560 000561 CTTGCAGGAT CATCTGACGG AAGTGTCCTC TGACGGAAGG GTCCTCCGAT GGAAGGGTCC TCTGATGGAA GGGTCATCTG 000640 000641 ACCACTGTCT CAGCTGCCCT GCAGATCCCC ATAAAGCCAC CACTCTTGCC CCAACTCCAG AAGAAAAATG TTGGGACCAA 000720 000721 TAATCACCAT CATATTCTTT CCACTTTGAG GTATTAATTA CTCAAGTGGG GATTACAGTC CAGGTCTCAC TGCCATATCT 000800 000801 GTGGGCCTGC TATCTGGTCC CAGGTGATAT AGGGGAAGCT ATTCTGTTTT ACCTGGGAGT GTTAGACCTC AGCCCAGTAC 000880 000881 TTTGCCCACT TGTGGATGCC CAGTGGCCAG CCCACGGGTC TTCCTGCCCT AGCCCCAATC CAGCCCCAGG GAGGCAGTGG 000960 000961 TGCCAGCCTC CTGCCCGCAC CTGCTTAGAG ACTTTGAGCC ACGTCTTTTT GAGCCGGAAG ATTGCACTGC GGTTCATGGA 001040 001041 CGAGGTGATC TCCAGTACGG CATTGTAGTT GTGGAGGCAG CGGCATATGT CAGCTACGGC CACCCACTTC TCGATGGCGC 001120 001121 TCACCCTGGC GTTGATGTCC TCATTGCGGA TGATTTCTGA AGCAATCAAG TTACTGATCT TTAAGCCGAT GCAATAAGAC 001200 001201 AGGGAAAAAG AGGAGTAAGT ATTGCAAAGA TGATAAATGG TCACTATTTG CAGATATGAT TGCCTGCTTG AAAATACAAG 001280 001281 AAGGAATTGG AAAACTACGA GAACAACTAA CAGAGCTTGC TAGGGTTGCT GGCTAAAGGT TCAATATACA AAAATGAAAA 001360 001361 GTTTATATAT ACATTAGCAA TAATCAATTA GAAAATACAA CAAAAATACA ACCTTCCAAA TAACAATGGG AATCTGTAAA 001440 001441 TACCTAGGAA CTTAATGAGA ACTATGTAGG ATGGAAAAAA CAGGTCACCA AAGGATATAA AAGGCTTGAA TAACAGAGAA 001520 001521 AGAGATCAAA TTCCCAAATG GGAATGTAAA TATGTCATTT TTCTGACAAC TAATACATGT GTTTAATGTA ATCCAATAAA 001600 001601 ACACTCAGGC CAGGCGCGGT GGCTCACACC TGTAATCCCA GCACTTTGGG AGGCCGAGGC AGGCGAATCA TTTGAAGTCA 001680 001681 GGAGTTCAAG ACCAGCCTGA CCAACATGGT GAAACCCTGT CTCTACAAAA AATACACACA CAAAAAAAAT TAGCTGGGCG 001760 001761 TGATGGCGCA TGCCTGTAAT CTCAGCTACT TGAAAAACTG AGGCAGGAAA ATCACTTGAA CCCAGGAGGT GGATGTTTCA 001840 001841 GTGAGCCAAG ATTGCGCTGC TGCACTCCAG CCTGGGTGAC AGAGCGAGAC TCCATCTCAG |
Predicted Small Protein
Name | ENST00000316148.4_smProtein_215:451 |
Length | 79 |
Molecular weight | 8414.3064 |
Aromaticity | 0.025641025641 |
Instability index | 66.2141025641 |
Isoelectric point | 11.2416381836 |
Runs | 7 |
Runs residual | 0.0439337085679 |
Runs probability | 0.0483130189014 |
Amino acid sequence | MHGGGSSPQAQSTGALGSPGRRETAGQHRWVQHLSEDTNKVEMVKAMAHRAGKGQTKCGR KKTQRGGRRGWQRGSCSE |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLHHHHHHHHHHHHLLLLLLLLL LLLLLLLLLLLEELLLLL |
PRMN | - |
PiMo | - |