ENST00000369843.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000369843.3 |
Source |
Gencode19 |
Same with |
lnc-GNAT2-1:1,NONHSAT005052 |
Classification |
antisense |
Length |
688 nt |
Genomic location |
chr1-:110171039..110172927 |
Exon number |
3 |
Exons |
110171039..110171456,110171725..110171939,110172873..110172927 |
Genome context |
|
Sequence |
000001 GGCTGTTGTT GCTGAGCGGA GACATGGCGA TGCCGATCTG GGCCAGGTAG TACAGAACCC TGGGGTCAGA ACCAGAGCTG 000080
000081 CAGCTGGATG CGAAGCCGGC TGCCCTCCCC ATACCCAGCT CTGCGCTGCC TGCTCACGTG CTCTAAGAAG AGATGCAGTT 000160 000161 CCGGGTGGCT GGCAGGGTGC ACAGTGGCCT CGAACAGTGG CAGGAAGATG TTCTCCAGCA TCTCCTGGAA GTTGGCCAGC 000240 000241 TGGCCCTTGG TACGGTACAC ATCACTGCAG GTTCCCCTCC CACTCCAGGG ACACTCACAA GAGGCGGGGC ACCTGCACCA 000320 000321 GCCAGCGCAC GTTGGGGGAG TGCACGCGGT GCATGACGGC CCAGCGCGCC AGCTTGTCCC ACTCATCCCT CGAGCGCCCG 000400 000401 TAAATGGAGA GCCGCAGCTC TGCATTCTGG TATTTGCTCT CCTCCAGGTC TGACATCACC TCCTAGACAT GAGGTGAGCT 000480 000481 GAGTCAGACA TGAGGTGAGC TGAGTCAGAG CTCTTCAGGG GGTCATCTGC CTACCCTCCT TGAGTCTCAC CCCCTAAAAG 000560 000561 CCCCCAGATC CTCAGGCTCG AGGCTTGGCA GGGAAGGCTG CCTCCTTACC TTGATGATGT GAGCAAAGTA CTTCCCAGAT 000640 000641 ACCCTGTTGT CCGTCTTGAT GAAGATCTCT CGGAGGACGG ACTCCCCA |
Predicted Small Protein
Name | ENST00000369843.3_smProtein_152:355 |
Length | 68 |
Molecular weight | 6954.7613 |
Aromaticity | 0.044776119403 |
Instability index | 48.552238806 |
Isoelectric point | 9.20611572266 |
Runs | 7 |
Runs residual | 0.0388372274752 |
Runs probability | 0.0444646327 |
Amino acid sequence | MQFRVAGRVHSGLEQWQEDVLQHLLEVGQLALGTVHITAGSPPTPGTLTRGGAPAPASAR WGSARGA |
Secondary structure | LEEEEEEELLLLHHHHHHHHHHHHHHHHHHHLLEEEEELLLLLLLLLLLLLLLLLLLLLL LLLLLLL |
PRMN | - |
PiMo | - |