ENST00000398804.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000398804.3 |
Source |
Gencode19 |
Same with |
lnc-HYI-2:1,NONHSAT002818 |
Classification |
antisense |
Length |
592 nt |
Genomic location |
chr1-:44165436..44173809 |
Exon number |
5 |
Exons |
44165436..44165734,44168327..44168399,44169235..44169318,44170024..44170128,44173779..44173809 |
Genome context |
|
Sequence |
000001 ACTGACCCCA GTTCTGGCCC CCGCTAGAGC AAGACTTCAG CGTTCCATGT CTGCTGTGCT GTGGAACCCA GAGTGCTCTT 000080
000081 GCCTGGATGG CTGAGAATCC CTTGGACCCT GGAAGCACCT ACTCCATGAT GGCCCGCAGG AGGACCAAAC TGGAGACAGT 000160 000161 CCTGGCTCTG AGGAAACAGG AAGGAAGGAG GGTGAAAGGA ACGTCCACCT GCACACAAAG GAAAGATGAA AAAGAGTCAC 000240 000241 CTACCATGGG ACCTGGCAAA GTACTTCAGA ACTTTTATTC CTTCCAGAAG CAGTGTATCA CAATAGATTG AATCAAGAAG 000320 000321 TGACATTAAG GCCAGCGCGG TGGCTCACGC CTGTAATCCC ACCACTTTGG GAGGCCGAGG CGGGCGGATC ACGAGATCAG 000400 000401 GAGATCAAGA CCATCCTGGC TAACATGGTG AAACCCCATG TCTACTAAAA ATACAAAAAA TTAGCCGGGC ATGGTGGCGG 000480 000481 GCGCCTGTAG TCCCAGCTAC TCGGGAGGCT GAGGCAGGAG AATGGCGTGA ACCTGGGAGG TGAAGCCTGC AGTGAGCCAA 000560 000561 GATCATGCCA CCGTACTCCC GTACTCCAGC CT |
Predicted Small Protein
Name | ENST00000398804.3_smProtein_86:310 |
Length | 75 |
Molecular weight | 8440.6334 |
Aromaticity | 0.0540540540541 |
Instability index | 58.8001351351 |
Isoelectric point | 9.75457763672 |
Runs | 11 |
Runs residual | 0.00599868160844 |
Runs probability | 0.0431982784924 |
Amino acid sequence | MAENPLDPGSTYSMMARRRTKLETVLALRKQEGRRVKGTSTCTQRKDEKESPTMGPGKVL QNFYSFQKQCITID |
Secondary structure | LLLLLLLLLLHHHHHHHHLLLHHHHHHHHHHLLLEELLLLLLLLLLLLLLLLLLLLLLLH HHHHHHLLEEEEEL |
PRMN | - |
PiMo | - |