ENST00000411512.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000411512.2 |
Source |
Gencode19 |
Same with |
NONHSAT011179 |
Classification |
antisense |
Length |
736 nt |
Genomic location |
chr10-:5754137..5786030 |
Exon number |
2 |
Exons |
5754137..5754651,5785810..5786030 |
Genome context |
|
Sequence |
000001 AAAGTGTAAT GCTTCTAAAA TAAAGTCTGA CAATTCAGAA AGAGTGCTCA ACTCAACACA TGACTAGCAG CAACATGCTT 000080
000081 TTGGTTTCTA GTGCCTATCA TGCTAGAATC CTCTTCTTCA CATTCCAGTG TGCCAACTGG TGGAGGGAGT GCGATAGCAC 000160 000161 ACGTGTGCCT TTCAAGTACA GGCACAGCAT TCAACAAGAT GACAAAAAAA CAAAAGCCTA CAATAATTAC CTTCCAAGTG 000240 000241 ACTATTTCCA AGGATCTGCT GCGTCTGAAA AATTATAGCT AAAAAGTGCT AGGCTTATAT ACCAAAAATG ATGGGTTTAC 000320 000321 CTCTTTTAAA ACTAAAACAA AACCATCATA GTGTGTACCA AGCACCTCAC CTCATTTAAG AAAATGTCAT TTTTCACCAA 000400 000401 AGTCACTTGA CTGTACTGAA AACCATGCTC AGATGAAGAG TCCAAGTAAG AAGTATGGAG GAGTGAAACT GCCCTCTGGA 000480 000481 AGAGAGAGTC TGAACTCAAG GACACTGTCT CAAAAACTGT AAAACACAAA CAAAAATAAC GCAGCTATTT AAGATTCCAA 000560 000561 AGGATGGGGT TAAGGGAGAC ACACTGAATA TCACTCAAAA CATCACCTAT TCCTTTCCTA TATAACTAAG AAATATTTGT 000640 000641 ACTGTCTTAA CAAAATTTAA AAGACCTCTG ATGTAAAGAA AATAACCTAA ATAAATTAGA ACTGAAGCTG AATTACTTTT 000720 000721 AGTACAGGAG CTAAAA |
Predicted Small Protein
Name | ENST00000411512.2_smProtein_59:277 |
Length | 73 |
Molecular weight | 8494.4612 |
Aromaticity | 0.166666666667 |
Instability index | 44.4847222222 |
Isoelectric point | 9.03143310547 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0257119864963 |
Amino acid sequence | MTSSNMLLVSSAYHARILFFTFQCANWWRECDSTRVPFKYRHSIQQDDKKTKAYNNYLPS DYFQGSAASEKL |
Secondary structure | LLLHHHHHHLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEELLLLHHHHHHHHLLLLL LLLLLLLLLLLL |
PRMN | - |
PiMo | - |