ENST00000413557.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000413557.1 |
Source |
Gencode19 |
Same with |
lnc-TYW5-1:4 |
Classification |
intergenic |
Length |
460 nt |
Genomic location |
chr2-:200758983..200773881 |
Exon number |
2 |
Exons |
200758983..200759386,200773826..200773881 |
Genome context |
|
Sequence |
000001 CAGCCCTGTA GGAGACACCT CCAGAGAAAG TAACAGCTCT CAATTGATTA GCTGAGAATA AACAGATGCT TTTACAGCTC 000080
000081 GCCTTGGCGG GAAGATCTGG CACAAATGAA GTATCTATAA GGAGCAGCAG AGTCAAGGTG GTGATCCTGT GGATGAATAA 000160 000161 CTGAAACCTG ATATACTTGA CAGCAGAAAA TATAAAGCAA ATTGAAAAGG AGAGAGTGTG GAGATAAATA AGAAAATGAA 000240 000241 AGAACTGATA AAGTCACTTG GATTAAAAAA CCTGGGAGTA AGGGCTTTGT TTATGATTGA ACTTAAGAGA GAATTGAGGG 000320 000321 ACCACCTACC TTTGATGTTA ACGAGAAAGT AAAGAGGAAA CATATTTAGA GATACCCTTT GGTGAAAAAC AGAAATGGAT 000400 000401 GTGTCATTTG ATGCATCACA TTATTTATTC AACAAACTCT TAGTGAGAAC TTACTGTGTA |
Predicted Small Protein
Name | ENST00000413557.1_smProtein_65:163 |
Length | 33 |
Molecular weight | 3557.1963 |
Aromaticity | 0.03125 |
Instability index | 69.290625 |
Isoelectric point | 11.7113647461 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0497766674237 |
Amino acid sequence | MLLQLALAGRSGTNEVSIRSSRVKVVILWMNN |
Secondary structure | LHHHHHHHLLLLLLEEEEEELLEEEEEEEELL |
PRMN | - |
PiMo | - |