ENST00000413943.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000413943.1

Source

Gencode19

Same with

lnc-ANKRD13C-1:1,NONHSAT003857

Classification

intronic(AS)

Length

575 nt

Genomic location

chr1-:70825245..70826120

Exon number

2

Exons

70825245..70825678,70825980..70826120

Genome context

Sequence
000001 GCTGGCAGTT ATCTTGTGTT CTTGAAGGAA GCAGGCCTGA GGAGGACTCC TCATACAGAG AGAAACACCG AGAGATTCAC 000080
000081 TGAAAAACTG ACATGGGATC CTGAGGGGCC ACTCTTGAAG ACTTATCTCT GCACCTTTCT GGGCACTGTG CATACAGCAA 000160
000161 TGATCAGCAT GATTCCAGTG CTCAGAGAGC TCCAAGGATT AGTTGAGACC AGACAAGAAT ATCAAGGAGG CATGCAGAAG 000240
000241 TTACAATGGG AAATCAAAAA GAAGACAAAG GAGGGACACC TAATTCAGAA CGATGGGTTT GTTGGATAGG AGAGAAAAGG 000320
000321 AGACGAATGG GCAGGTATCA TCAAAGATTC CTAAGAAGAA GTTCCTAACT TCTGTTTTTG TGCCATTGAC TCTTTGGCAG 000400
000401 TGTGGAGAAA CCCAGGGACC CATTTTCAGA ACAGTGTTTT TAAATGCATA AAATATTTTG GATTAAAAGG AAACTCTGAG 000480
000481 TATTGAAATA CCTAACAAAA TATTTTAAAA GCAAATTTGT AATACAGTAA TGTATATGCT TCTTTATTAA CTAATTAAAG 000560
000561 AACAAGATAT AGCAA
[back to top]

Predicted Small Protein

Name ENST00000413943.1_smProtein_245:367
Length 41
Molecular weight 4894.5055
Aromaticity 0.1
Instability index 101.2475
Isoelectric point 11.2538452148
Runs 6
Runs residual 0.0280241935484
Runs probability 0.0299711476183
Amino acid sequence MGNQKEDKGGTPNSERWVCWIGEKRRRMGRYHQRFLRRSS
Secondary structure LLLLLLLLLLLLLLLLEEEEELLLHHHHHHHHHHHHEELL
PRMN -
PiMo -