ENST00000414393.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000414393.1
Source	Gencode19
Same with	lnc-GINS1-1:1,NONHSAT079169
Classification	antisense
Length	4666 nt
Genomic location	chr20+:25604681..25658710
Exon number	5
Exons	25604681..25604771,25612794..25612924,25614685..25614806,25615365..25615463,25654488..25658710
Genome context
Sequence	000001 ACCAGACCAT CTCCCGGCGC GGGTGGAATT CCCGCGATCT GTCTCATTCC CTGCGCCGCC GAGAAAAGTG AGATCCCGCG 000080 000081 AGACTCCCAG GAATGGCACC ATTGTTGTGC GGATGCTGAT GCCCAGCGTT GAGCCTGTCG TCTCCTATAT TAGGGGAAGT 000160 000161 TCTCCTGGCC CTTCCCAACT ACCTCCCCTG TGCAAGTTTA TTACAACTGA ACGGCCTCAA GGATGAAGTC TGGCTCTGTT 000240 000241 GCCCAAGCTG GAGTGTGTTG GCACCATCTT GGTTCACTGC AACTTCCACC TCCCAGGCTC CAGTGATTCT CCTGCCTCAG 000320 000321 CCTCAAGGGT AGCTGAGATT ACAGGCTGGA GTGCAGTGGC ATGATCTCAC CTCACTGAGA ACCTCCACCT CCAGGGTTCA 000400 000401 AGTGATTCTG CTACCTCAAC CTCCCAAATA GCTGGGACTA CAGGCACTTT CCCTACATTT TCAAAGGCCT GCATCATCAC 000480 000481 ATCTGCCACA GCATTCTCTA TCATTGAGGC ATTTTCTCAG GAAATCACCT GTGAAATATT TTGCAGCTAA CCACCTACCT 000560 000561 GTGCCCCACC AGCCAACATG CTTTACTCCT GCCAGGCAGG TGAGTGGTCC CCAGATCCCT ATTTTACCAC TTGTTTTGTC 000640 000641 AGACTGTTCT TGGTATCAGC TGTGTTGGAG GGAGTTCTCT GCAAAGACCA ATATGGGACT GCATATACAG AGATTTTATT 000720 000721 TCCAGATATG ACTGTGAGAG AATGATGAGG GGAGCAGTTA CTTAGTCTAT TTGAGCTGTT ATAATAAAAT ACCACTGACT 000800 000801 AGGAAATGTA TAAAGAGGAC TTTATTTTCC CAGAGTTCTG GAGGCTGGGA AGTTCAACAT CAAAACATCA GTAGGTGCAG 000880 000881 TTGTCTGTTG AGGGCTCATG TCTGTTTCCA AGATGATGCC TTCATGCTGC ATCTTTTGGA AGGGAGGAGC ATTGTGTCCT 000960 000961 CACAGAGCAG AAAATAGAAG GGCCACAGGA CAAACTCCCT CTATCAAGCC TTTTCATAAG GGCACCTGAT CCCATTCGCA 001040 001041 AAGCTCTATC TTCGTGACTT GACTTAATCA CTTCCCAAAG GTCCCACCTC CTAATACTTA CACTGTTTCA ACAGTAAACA 001120 001121 GTTTATGTAG AGTTTCAACA TAAATTAAGG AGGGGACAAA ACATCCAAAC CAAGGAAGGC TGGGAGGGAA GCCAGAGGGA 001200 001201 AAGTGCAAGA GGAGGTTTGG TGGAGGTGTC CTAGATTGTT TGCAGTCCAA GGAGGTTGGG GAGAGTGTAA CAGGCCTGCC 001280 001281 TTGGTATCCC TGCTCTGCAG TCACTGGCTA AGAGCAGTCC TTAGAAAGCA CAGCCTGGCA CAAATACAAC AAGAATATGT 001360 001361 GCTCAGTAGG AAAGAGACCA CATTTCCCCA ATAGCCCAGG TAATGCCCTC CCCTCAACTG GCATCTCTGT TCCCTAAACA 001440 001441 TTGACCTCTT TTCTCTGAAT CTCTTGGGGA CACATGGGTT GAATTCAGGT TCTCTGTAGC CCTCTGGATT CTGTCTGCCT 001520 001521 CTGTTATATC TTCACGAACA AGTTATGCAG CCTCAACTAA AGCTTGTAAC AAAGCAAAGT TACTCTCCTG AGTGTGTCCT 001600 001601 CTGATGGATG GTGAGATATA ACTTCAAGAT GAAGCCTCAC CCACACTCCC TGTACAAAAA CGCTTCTCAC GTAAGTGTCT 001680 001681 CTTTAAGTGC TTACTGTAGT ATGACTTATT GCTAAACTTT CGTCCACACT CTTGGCATTC ATAAGGCCTC TCTCCTGTGT 001760 001761 GTATTCTTTC ATGCACAGTG AGGTCTGACT TACTGGTATA GCCTCGCTTA CACTCCTGGC AAACAAAAGG CTTCTCCTTT 001840 001841 GAGTGTATCC GCCAGTGGTG TCTGGTGAGA CTTCTCTTCC AGCTGAAGCC TTGCCCACAC ACATTACACA CGAAGGGCTT 001920 001921 CTCCCCTGAG TGTGTCCTCT GGTGTGTGAG GAGATTTCCC TTCCAGTTGA AGCCTCGCCC ACACTCCTTG CATACAAAAG 002000 002001 GCTGCTTGCC AGAATGTGCA AGCTGGTGTT TCACAAGATT TGACTTCCAG ATAAATCCTT GCCCACATTC ACTACAGATG 002080 002081 AAAGGCTTCT CCCCTGAGTG TGTCTTCTGG TGGAAGAGGA GAGTTGATTT TAGGATGAAG CCTCGCCCGC AATCCTTGCA 002160 002161 ATTAAATGGC CTTTCCCCCG AGTGTGTCCA CTGATGTCTA AGAAGATTTG CCTTCAAACT AAAACTTTTC TCACACTGCT 002240 002241 TGCACATGAA GGGCTTCTCT CCTGAGTGTG TCCTCTGATG TATGGTGAGA TTTGGCTTCA AGGTAAAGCC TCGCCCACAA 002320 002321 TCCCTGCAGA AAAAACGTTT CTCACCCAAG TGTGCCCTCA GGTGCTTGTT ATAGGAGGAC TTATCCCGAA ACCTTCGCCC 002400 002401 ACACTCCCGA CATCCATAAG GCTTCTCCTC TGAGTGTGTC CTCTGGTGTA AAGTGAAGGT TGACTTTTGG ATAAAGCCTC 002480 002481 GTCCACAGTC CTTGCACACA AAAGGCTTCT CCTCTGAGTG TGTGATCTGA TGTTTCACAA GGGTTGACTT CTGAATAAAT 002560 002561 CCTTGCCCAC ATTCTCTACA AACAAAAGGT TTCTCCCCTG AGTGTGTTCT CTGGTGGTAG ACAAGAGTTG ACTTTTGGCT 002640 002641 AAAGCTTCGC TCACAATCCT TGCACACAAA AGGCTTCTCC CCTGAGTGTG TTCTCTGGTG TCTGAGGAGA CTTCCTTTCA 002720 002721 CGCTAAAACT TTGCTTACAC TGCCTGCACG CAAAGGGCTT CTCCCCTGAG TGTGTCCTCT GGTGTGTGAT AAGGTGTGAC 002800 002801 TTATTGCTAA AGCCTCGGCC ACACTCCTGG CATCTGTAAG GCTTCTCTCC TGAGTGTATT CTCTTGTGCA CAACGAAGTA 002880 002881 TGACTTATTA GTATAGCCTC GCCCACACTC CTTGCACACA AAAGGCTTCT CCCCTGAATG CGCCTTCAAG TGCTTGTTGT 002960 002961 ATGAGGACTT ATCGTTAAAC CTTCGCCCAC ACTCCTGGCA TTCATAAGGC TTCTCTCCTG TGTGTGTTCT CTCATGCACA 003040 003041 GTGAGGTATG ACTTACTGGT ATAGCCTCGT CCACACACCT TGCACAGAAA AGGCTTCTCT CCTGAGTGTG TCCTCTGGTG 003120 003121 TCTGAGGAGG TTGGCCTTGA GGCTGAAGCC TCGCCCACAC ACACTGCACA CATAGGACTT CTCTCCTGTG TGTGTGTTCT 003200 003201 GGTGCAAGAG CAATGCTGAC TCATCTCTAA AGCCCTGGTG ACACTCCCTG CATGTAAAAA GTTTCTGCCT GGAATGTGCT 003280 003281 TTTTTGTGTA TGATTACCAT CATCTTCCGG CTGAAGTCTT GCCCACGCTC TGCACACTTG AATGCTCCCC ATCTTGAATT 003360 003361 TTCTATTCCT TTCAATACTT TGTCTATTTC TGTAGGATTT TCCCTCTGGC CTTGACTAGA CTCTATTTCC ACTACACTGT 003440 003441 TCCTCCTCCT TGAGCTTACT GCATGTCTTA GGGGTGGGCT GGAAAATGCC ATGGGCTTAG TGCTTTTTTC TTTCTCTTGA 003520 003521 CCTTCAGCTG TGTCACTCTG GAAGCTTTGA TCAGAAAATT GTAGTTGCTG TTGCCTCTGA TGTGCAAGTC CAAGATTCTT 003600 003601 GGGCCGCAGG ACATGTTCTG CATATATTCC TGGAGAATAG ACCAACAATG AGACTGAATC AGTAACGAAA AGTCTTCTAT 003680 003681 GAAAGAAAAA CCCAGAACCA TATTGCTTTA CTGCTTAATT CTAATAAACT CATAAAGAAC AACAAACACC AATTCTTCTC 003760 003761 AAACTATTCC AAAAAATTGA AGCAGGGCAG GGAGGAATTC TTCCTAACTC ATTCTAAAAG GCCAGCATTA TCCTGATACC 003840 003841 AAAACCAGAC AAGGACACAG CAAAAACAGA GAACTACAGG CCAATATCCC TGATGATGCT AAATGGAAAA ATCCTCAACA 003920 003921 AAATACTAGC AAAACCAATG CAACAACACA GAAAAGATAA TACACCATGA TCAAATGAGA TTTATCCCAA GTATGCAATC 004000 004001 ATGATTCAAC ATACACAAAT CAATACTTGT GATACATCAC ATCAACAGAG TGAAGGACCA AAAGACATAT GATCATCTCA 004080 004081 ACAGATACAG AAAAAGATTT GATATGATTC AAAATCCCAT TATGATAAAA ACTTTTTTTT TTTGAGACAG GGTCTCACTC 004160 004161 TGTCACCCAG GCTGGAGTGC AGTGGCATGA TCATGGCTCA CTGCAGCCTC GACCTCCCAG GCTTACACGA TCCTCCCACC 004240 004241 TCAACTTTCC AAATAGCTAG ACTACAGGTG CCTGCCTGTA GTCAAGCCAT AGGTGCCATT GCCTGGCTAA TTTTTATATT 004320 004321 TTTTGTAGAG ATGGGATTTC GCCATGTTGT CCAGGCTGGT CTCAAATTCT TGAGCTCAAG CAATCTGCCC ATCTTGCCCT 004400 004401 CCCAAAGTGA TGAGATTAAA GGCATAAGCC ACCGCACCCA GCCTATGATA AAAACTTAAA TCAGGTGTAC AGGAAACATA 004480 004481 TCTCAACATA ATATAGACAA TATGTTCCAA ACCCACAGCA AACATCTTAG TGAATGGGGA AAAGATAAAA GTCTTTCCTC 004560 004561 TAAGAACTGG AAGAAGATTC GAATGTCTAC TTTCACCACT CTTATTACCA TAGTTCAGGG AGTCCTAGTC AGAACTATGG 004640 004641 TAAGAGAAAA AAATAAGGCA AGAAAA

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