ENST00000419624.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000419624.1 |
Source |
Gencode19 |
Same with |
lnc-CD177-1:1,NONHSAT066583 |
Classification |
intergenic |
Length |
500 nt |
Genomic location |
chr19+:43657431..43665014 |
Exon number |
3 |
Exons |
43657431..43657763,43659324..43659477,43665002..43665014 |
Genome context |
|
Sequence |
000001 AAAGGAGGAT GTTGCTGATC TCAGTACAAG CAATGTTAGA GAAAGGGGAA GATGGAAGTG GACGAGGACC AGTGAGTGGA 000080
000081 AGGTGACAAA TGGAAGCAAA GAAACCCATC CAGACCATTG AAGATGCTTG AGCGAGAAGA AAGAGGCGGT GGAGGGAATG 000160 000161 GAAGCCCGAG GAAGTCATTT GTTGCAATAG GATGCCTCAG AGCACGTGTA GGGTGCGGGG CAGAGCCCAT GCAGAGGGGC 000240 000241 TGTGGAAGGC TGGCAGGGTG CAGGTGGCCC CACTCTCCGT CACCCTGAGG AATATGTGGT CAGAGTTAAA GCTCAGTCTG 000320 000321 TTTCTGGGAT CAGTATTTTG TCATGGCAGC CCTAGCAAAC TACTACAGGG ACTGTGAGGG TTAAGATGAC ACCAAACATC 000400 000401 AAATGCCACT CCCTGTTCCA ACACTGAGAC CATTCCACAG CCTCTGAATG ACAAGACAGG CCTTCAAAAT CAAGACCACC 000480 000481 TGGCTAGATT CTGGATATTA |
Predicted Small Protein
Name | ENST00000419624.1_smProtein_191:376 |
Length | 62 |
Molecular weight | 6706.8476 |
Aromaticity | 0.0655737704918 |
Instability index | 52.5393442623 |
Isoelectric point | 10.8950805664 |
Runs | 12 |
Runs residual | 0.0439042773695 |
Runs probability | 0.0349099099099 |
Amino acid sequence | MPQSTCRVRGRAHAEGLWKAGRVQVAPLSVTLRNMWSELKLSLFLGSVFCHGSPSKLLQG L |
Secondary structure | LLLLLLLLLLHHHHHHHHHLLLEEELLLEEEHHHHHHHHHHHHHLLLEEELLLHHHHHLL L |
PRMN | - |
PiMo | - |