ENST00000421475.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000421475.2 |
Source |
Gencode19 |
Same with |
lnc-SERHL2-1:3 |
Classification |
intergenic |
Length |
684 nt |
Genomic location |
chr22+:42896631..42906658 |
Exon number |
9 |
Exons |
42896631..42896698,42897631..42897780,42897925..42898038,42898357..42898398,42898755..42898774,42899205..42899279,42901039..42901148,42905034..42905116,42906637..42906658 |
Genome context |
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Sequence |
000001 GGCAGGCGTG AGGGTGTGAC GGCCGCGCAT TCGCCAGACG AGAGCGATGG CTGAGAACGC CGCACCAGGT CTGATCTCAG 000080
000081 AGCTGAAGCT GGCTGTGCCC TGGGGCCACA TCGCAGCCAA AGCCTGGGGC TCCCTGCAGG GCCCTCCAGT TCTCTGCCTG 000160 000161 CACGGCTGGC TGGACAATGC CAGCTCCTTC GACAGACTCA TCCCTCTTCT CCCGCAAGAC TTTTATTACG TTGCCATGGA 000240 000241 TTTCGGAGGT CATGGGCTCT CGTCCCATTA CAGCCCAGGT GTCCCATATT ACCTCCAGAC TTTTGTGAGT GAGATCCGAA 000320 000321 GAGTTGTGGC AGCCTTGAAA TGGAATCGAT TCTCCATTCT GGGCCACAGC TTCGGTGGCG TCGTGGGCGG AATGTTTTTC 000400 000401 TGTACCTTCC CCGAGATGGT GGATAAACTT ATCTTGCTGG ACACGCCGCT CTTTCTCCTG GAATCAGATG AAATGGAGAA 000480 000481 CTTGCTGACC TACAAGCGGA GAGCCATAGA GCACGTGCTG CAGGTAGAGG CCTCCCAGGA GCCCTCGCAC GTGTTCAGCC 000560 000561 TGAAGCAGCT GCTGCAGAGG CAGAGAACAG CATTGACTTC GTCAGCAGGG AGCTGTGTGC GCATTCCATC AGGAAGCTGC 000640 000641 AGGCCCATGT CCTGTTGATC AAAGCAGTCC ACGGATATTT TGAT |
Predicted Small Protein
Name | ENST00000421475.2_smProtein_176:307 |
Length | 44 |
Molecular weight | 4760.4927 |
Aromaticity | 0.0697674418605 |
Instability index | 79.9209302326 |
Isoelectric point | 10.7366333008 |
Runs | 8 |
Runs residual | 0.0287431408414 |
Runs probability | 0.0235492845787 |
Amino acid sequence | MPAPSTDSSLFSRKTFITLPWISEVMGSRPITAQVSHITSRLL |
Secondary structure | LLLLLLLLLLLLLLEEEELLHHHHLLLLLLEEEEEEHHHLLLL |
PRMN | - |
PiMo | - |