ENST00000423942.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000423942.1

Source

Gencode19

Same with

lnc-LHX2-2:1,NONHSAT134662

Classification

intronic(AS)

Length

788 nt

Genomic location

chr9+:126498716..126514220

Exon number

2

Exons

126498716..126498745,126513463..126514220

Genome context

Sequence
000001 TTAGCTTCCT CAGGAGAGCT GTTAGGGAAG CTTCTTTTTT GCTCCGTGGA AATGGAGCTT TTCTGTGTTT CGAGTGAAAA 000080
000081 TGAATGTAAC ACAGCTGAGA ATGGATGCAA TGGTCATTCC AGTCTTGAGA TCAGAAAGTG CTCCAGAAGG AAGAAGGTTG 000160
000161 TCACTGAACA CCACTCAGGT TTAGAATCAA GTCCATATGC CAACTAGCAT GGAAGAAGGG ATAATCACTA TCCTTGTTTT 000240
000241 TAAAAGAAAA CAAAAAAACC CCCTGCAGTT GAGGTTTGAA AAATCCAGTC TAAATCTGGG TGCTACCTCC AAAGTGACAC 000320
000321 GCAACATCCC TTCAAACAAT AACCAGAAAA ACCCAAGCAC ATTTCACATT CAAAAAATCA CTTTTGCCTT GGTCTAAAAA 000400
000401 CATCATCATC TCTAATGTCT ACCCGAAACC AGCTGACAGT ATTCCATTTG CTACCGGATA AATCTAAAAT CTTGAGCACG 000480
000481 CCCCAGAAGC ACTCACAATT GGACCCCAGA CTTCGATGGT ATCATCTCTT GCTATTGCTC CCTCACTGCA TTCTCAGCAT 000560
000561 CCTTTCATCT TGCTATACCT TTCATTTCTT GGGGACTTTG TGTATCAGTT CTCACTGCCT AGAGAGCTGT TCTCCCATTT 000640
000641 TCCTCCAGCC AAGCCCCCAC TCATTCTGCA AGACTCAGTT TAACTGGAAC TCATCAGCAA CACTTTCCCT TATTCTCAAG 000720
000721 TTAGAGATGG GCACTGTCTA ATCTGTGACT TTGAAGAACC TTACACATAA ATATGTTTTC TTAAAACA
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Predicted Small Protein

Name ENST00000423942.1_smProtein_515:682
Length 56
Molecular weight 6213.2044
Aromaticity 0.145454545455
Instability index 55.5072727273
Isoelectric point 6.21246337891
Runs 9
Runs residual 0.0121212121212
Runs probability 0.0453590845749
Amino acid sequence MVSSLAIAPSLHSQHPFILLYLSFLGDFVYQFSLPRELFSHFPPAKPPLILQDSV
Secondary structure LLLHHHHLLLLLLLLHHHHHHHHHHLLEEEEELLLHHHHHLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiii