ENST00000424748.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000424748.1 |
Source |
Gencode19 |
Same with |
lnc-C2orf42-2:3 |
Classification |
intergenic |
Length |
793 nt |
Genomic location |
chr2-:70321026..70322298 |
Exon number |
2 |
Exons |
70321026..70321610,70322091..70322298 |
Genome context |
|
Sequence |
000001 CCAGAAAGAG GGAGGAATTT GTCCAAGCTC TCCCAGTGAG CTGATGCCAG AGCCAGGACT AGAACTCAGG TCTCCCAATT 000080
000081 CTCAGCACAG TGTGATTTTC CTTGCAGAAT GTTGATGCTC AAAGAACAGG AACCCCAGAA CCCCAGGGAG GTAAGGAAGA 000160 000161 AGAGCACAGC CAGGATCAGA AGAGTGAAGA AACAATGATG TCCCACAGGT CACAGGGAGT AAGTAGCTGC TCTAGGGGTG 000240 000241 AACCCAAGAG TGGTGATTCA CTGTCCAAAC TACTGGCTGG AGGAGAGCTC GTGGTGGTCA TGTACGTGTG TGCATGTGTG 000320 000321 TGTGTCTATA TTTGAGTGGG GCAAGGGAGG GGATTGGGGA CCGGGGGAGA CCAGCCTTCT AAACACATGA TACAAATACT 000400 000401 ATGGCTATGA CACAACAGGT GTTTGTCAAC CTGTTCCAGC TCTTCCCAAC TATGGCAGTG GCTATGGCCT AACAGCTGGA 000480 000481 GGCAGGAACA GGGCAGTGAC AAGAATCAGC AACTGCATAG GGGCCTCATC AATTTCCAGT CCTCCATCCA GAAGAGGACA 000560 000561 GGACATGCTC AAGCTGCCCC AAAGAGAAAG GACAAAGGAG AGGAATTCTG AGATGCAAGT CCCTATGGAA GAGGGGACAG 000640 000641 AGTTAAATTC CAGCAGTCCA ACAGACTATG GCTAGAGCCA TAGTCTTCTC TTACCTGTAT CTTTAACGTT CAGCTTACTA 000720 000721 TTGGTTCCTT ATTATCTCCT GTTAGTGAGG TTCCTTTCAA AAACAATAAA ACAAAACAAT ATTTTCCCGC TCA |
Predicted Small Protein
Name | ENST00000424748.1_smProtein_194:334 |
Length | 47 |
Molecular weight | 4838.6721 |
Aromaticity | 0.0434782608696 |
Instability index | 61.7782608696 |
Isoelectric point | 7.67022705078 |
Runs | 4 |
Runs residual | 0.0744047619048 |
Runs probability | 0.0266737325561 |
Amino acid sequence | MMSHRSQGVSSCSRGEPKSGDSLSKLLAGGELVVVMYVCACVCVYI |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLEEEEEEEEEEEEEEE |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i????????????????????????????????????????????? |