ENST00000434458.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000434458.1 |
Source |
Gencode19 |
Same with |
lnc-PDSS1-1:5,NONHSAT011849 |
Classification |
intergenic |
Length |
880 nt |
Genomic location |
chr10+:26937029..26942383 |
Exon number |
4 |
Exons |
26937029..26937211,26938320..26938522,26939483..26939586,26941994..26942383 |
Genome context |
|
Sequence |
000001 CAATGCCAAC CACAAATGGG GCCAGCTAAG GGTGTGGTGG GAGAAGCCAT CCTGCAGCTC TGAGATCCAC AAAGTGGAGA 000080
000081 TAGCAGTAGC ACCAACTCCA CTGCTTTGGA GGCTGCCCAG TCGAATTTGG GAGCCAGCGA GGGACCTGAC AGCAGCACAT 000160 000161 TGGACACCAG AAGACACCCA AAGGGAGAGG AGTGGAAGAC CTTCTGGTGT GGGCTGGGCA GCAATTCACT TGAAGGAGAA 000240 000241 ACAGCCCGGG TGTGGAGAGG CGGCCATCCT TGGCGGGATC CTTTCTAAGG AGCCGAGAAA TCAACGTAGA GCTTCCTCTA 000320 000321 TCTGATTCTC TAACAACTGC AGACCTTCCA TGAGTCAAGC TTTGTGTCAA AAGGACAAAT TAAAAGGACC TATAAATGGC 000400 000401 ACCACCCAGC CCAATGGACA GATGCCCCAG GCTGCAGATT CTGTCAGTGC TGTTCTCGAA GAGGCCCAGG CACATGCTGA 000480 000481 AACATGGAAG GATAAGAAGC CAGCCCTCGG GAACCACCAG GAGCCAGGAG CACCCCCGGC CCCCCAAGGC CCCAAGTCCA 000560 000561 GCCTGCCCCA CCCCCTCCGG TGCAGAGGTC CTGTGACACC AGTGGCAGCC CCGCCACACC CCCCAAGGCC AAGGGCACAG 000640 000641 GCAGCGTGGT CTTCCCCGCC CCGCCCGACT ACTTCCTGCC GCCACAGCCA CCAATGCCGC CCCTGGAGTA CCCAGAGCTC 000720 000721 CCGCTGCCGT CCCCGGACTT CATGGAGACC CCCCTGGACT TCGTGCTCCC TCCCCTCGCT GTCGCCAAGA GGCCTCCTAT 000800 000801 GCCCCACCCC CCCAACAGGC ACGAAGCATC AATGTTCACA AGCAGCAAAT GAATAAAAGT TAAACGTTCT TCCTACTGCA 000880 |
Predicted Small Protein
Name | ENST00000434458.1_smProtein_395:595 |
Length | 67 |
Molecular weight | 7276.4447 |
Aromaticity | 0.0151515151515 |
Instability index | 97.6090909091 |
Isoelectric point | 11.548034668 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0238726121079 |
Amino acid sequence | MAPPSPMDRCPRLQILSVLFSKRPRHMLKHGRIRSQPSGTTRSQEHPRPPKAPSPACPTP SGAEVL |
Secondary structure | LLLLLLLLLLLLEEEEEEEELLLLHHHHLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLL |
PRMN | - |
PiMo | - |