ENST00000435043.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000435043.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1505 nt |
Genomic location |
chr6-:3182978..3195990 |
Exon number |
3 |
Exons |
3182978..3183960,3191061..3191491,3195900..3195990 |
Genome context |
|
Sequence |
000001 TGAAACATGC CTGTTTCCCC TTTGCTTTCT GCCATGATTA TAAGTTTCCT GAGGCCTTCC CAGCCATGCT TCCCGTACAG 000080
000081 CCTTCGGAAC TGTTTGACCA CATGATTTGC TTTGGCAGAT GGAACGTTAG CAGCTGGGGA CCTTTCTGCC ACCACAAAAG 000160 000161 CCTAGATTAT CCTGATGGAC GATGGAAGAC ACATGGCTGT TGTTCCAGCT GACATCAAGC CAACCACTGG ACAAGATAGG 000240 000241 AAAGCTCTCC TAGAACACGA AGGCCCGAAT GAACTGGCCC AGAGCAGAGA AACTGCTCAG CCAAACTGCC AAGCTGTGAT 000320 000321 TAACAAAGGC TTCATCTTAA TCCACCAGAT TTTGGGGTGG TTTGTTACAC AGCGAATGCT AACTGATACA GTCATTATCA 000400 000401 TTAGGTCTTT CTTGAGCTGA TCATACTTCC CAGCATAGAA TACGCCAATG TCCTGCTCCT TATTCCTGGC TGCCAGCATT 000480 000481 GTAAGAGCTG AGTGGAAGGC TGGGGTTTTC AGCACTCAAT ATGCACTAGA CAATCCAAAA GATCTACAAA AACTTTACAT 000560 000561 CTACAAGCCA AGGCACTGAA TCTCAGCCCC AGAAAGAGAC TGTGACCTTC CTTCCTCATC AGGATCCCAA GAAGCCGTAG 000640 000641 AACAAGAGGC TAAGAGGTTC GAAGGACACT GGAAAGGCTT CATGCTGCTG TAGGTTGTGG ATGGACAAGC TTTGTGTCTG 000720 000721 GAGCTGCTGT AGTGGGCCAC TCAGTTAGTT CACCCAGGCT CCCACATTCT CCATGCTCTG TTTCAGGAAA CAACCAGAAC 000800 000801 TGTGGACAGT CTTACCAAAG ACACTAACAT CATCACCAGA GAATTAAAGA AATCCAGTGA GTGGCCCACA ACAATTGGCT 000880 000881 GGCATAGGAC ATGATCCTAG CTTCCCACAG GGCACTTGGG ATTGTGCAGT CAGAAGTGAT TGATGTGCAT ATGTTTCCAC 000960 000961 AGACCTCTCT GATGTCTATG CCGTCACCAA AAATATTCAG ACTGCAAACC AGGAAATGCA TTGAATTGCC ACCATTGTCC 001040 001041 TTATACTTCC GTTTAAGGAC ACTCCAGGCC CAACGTCTCA AGGCCTTTTA GGCTAGCTTC CTTCAAACCT CAAATCTTGG 001120 001121 TTGCTGTCTA ATTTAACCTT TAACCCTTTT ACCATTTGCC CTGAGAACAC TTGCCGGCAG CACTTCCAGC TGCAGCGTTT 001200 001201 ACCCAAAGAT ACCTCTGCCA GGAAAGACCT TGCTTTTATT ATTACTTTTG CATTTCTCTA GCATATTGAC ATTGGAAACA 001280 001281 AAAGACATCA TTCTATATAT AGCATTCTGG TTTTAGTGGT GGTAGTTCCA TTTACAAAAT ATAGTAATTC TTGATCACTG 001360 001361 AAAATGTCAG AGCCTAGAAA ACGGAGCATT CCTATGCGTG ATGTTAACAT CATTAAACAG TTGTTGGCCA AAGACTCATG 001440 001441 TGATGAATCC AATTTTTCTA AAATAAATAG CTCAGATGAT TCAGATGATT CTGATATTAG GTCTG |
Predicted Small Protein
Name | ENST00000435043.2_smProtein_890:1090 |
Length | 67 |
Molecular weight | 7655.1531 |
Aromaticity | 0.0757575757576 |
Instability index | 71.2151515152 |
Isoelectric point | 10.9097290039 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0468677233383 |
Amino acid sequence | MILASHRALGIVQSEVIDVHMFPQTSLMSMPSPKIFRLQTRKCIELPPLSLYFRLRTLQA QRLKAF |
Secondary structure | LHHHHHHHLLLLHHHEELLLLLLLLLLLLLLLLHHHHHHHHHEEELLLLLHHHHHHHHHH HHHHLL |
PRMN | - |
PiMo | - |