ENST00000436955.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000436955.1

Source

Gencode19

Same with

lnc-IVNS1ABP-2:1,NONHSAT008432

Classification

intergenic

Length

642 nt

Genomic location

chr1-:185576316..185597659

Exon number

5

Exons

185576316..185576533,185590593..185590718,185591859..185591971,185595624..185595687,185597539..185597659

Genome context

Sequence
000001 ACATTTGCAC AGATGCTGCT GCTATAGTAC TTTCAGGCAA GGCCAAGGCT TCTTGAAAGG CTGGTCATGC CCCAGTGATC 000080
000081 AATGAAGAAC TCAGGGATAT CCCAAAACTC AGGACTATAA GGCACAATGG GGGAGCAGGT ACCAGGTGGC CAGCATCCTA 000160
000161 AATGACTCTC AGCAGCTGCA GAGAAGACCA TAATGGATGG ATATATAGGC TGACGTATAT CAGTTGGCTT CAGTTGTTTG 000240
000241 GTGATATTCA CCAGATCTAT ATTTTGCTAT TTTATGGATA TTATTTTCAA TTTCTGAGTT TTGTCTTTTC CAGAATGCCG 000320
000321 TACAGTTGAA ATCATACGGT ATATAGACTT TGCAGGTTTT TATGCGGACA TGTTTTTTGA CTCCTTTGGG CAAATACCAA 000400
000401 GGAGCAAGAT TGCTGGATCA TATGGAAAGA GGCATTACCA TATCAAAGCC TTTAGCCTTC TTGCATCACG ACAAAAATTC 000480
000481 GAACTTGGTG TTTGAAGAAC ATGAAAAATG AGGAGGAATA AAATAATCAT GAGTCTCCTG GTCATTAACT GCATGAAGTT 000560
000561 GAGCTGGTCA CTTAAGCCAT TCCTAATATG TAACTTGAGA GTATAGTATT AGATATTCAG TAAATTCCCT TCAAAATTCA 000640
000641 TA
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Predicted Small Protein

Name ENST00000436955.1_smProtein_161:328
Length 56
Molecular weight 6831.8028
Aromaticity 0.272727272727
Instability index 52.0874545455
Isoelectric point 6.69024658203
Runs 4
Runs residual 0.0787878787879
Runs probability 0.0416004239535
Amino acid sequence MTLSSCREDHNGWIYRLTYISWLQLFGDIHQIYILLFYGYYFQFLSFVFSRMPYS
Secondary structure LLLLLLLLLLLLEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooooooooo