ENST00000439150.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000439150.1

Source

Gencode19

Same with

lnc-TBC1D8-2:3,NONHSAT072799

Classification

antisense

Length

493 nt

Genomic location

chr2-:101589110..101592162

Exon number

3

Exons

101589110..101589305,101591747..101591875,101591995..101592162

Genome context

Sequence
000001 CCATCTGCCA CCCTACACTC TCAATCCCTA AGTAAAACGG ATTCTCTGGG GAGACGCAGC ACATCGCCTG GCTCTGCAGC 000080
000081 CCCCACCACA TTGTAGCGTA CACCCGTGGA GGAGTTTGGG GTCACACACT TACCGGCATG GTGGCTGCCT GGCTGAGCCC 000160
000161 GGGGACAGCA TGTACTCATC CGAAGAGGGG ACCCATGACC GTGGTGTGCA CAGTACAAGA GCTCGCTTGG GATCTCTGAT 000240
000241 AAAGGAAGTC CACCATGCAG GGTTGAGCTG AACCACAGAA GCCCAGCCTG GGAGCAGGGC TCCAGGACTC CCCAAGGATC 000320
000321 AGAAACCTCA ATGATAAATT TCCGACTGGA TGATACACAC TACACCTGTT CTTCAGCGAT GATGTATGGT GTGTCTAACA 000400
000401 TCTGCCTATT AGCAGCTGAA TTCCCTTCTA TGACGTGATA CATAATGTAT GGTGTGACAC AGCTGGGTAA TAAACAATGT 000480
000481 CAGCTGCGTC CTA
[back to top]

Predicted Small Protein

Name ENST00000439150.1_smProtein_137:238
Length 34
Molecular weight 3570.1903
Aromaticity 0.0606060606061
Instability index 66.3636363636
Isoelectric point 6.49835205078
Runs 7
Runs residual 0.0279973649539
Runs probability 0.0306861483333
Amino acid sequence MVAAWLSPGTACTHPKRGPMTVVCTVQELAWDL
Secondary structure LEEEEELLLLLLLLLLLLLLEEEELHHHHHHLL
PRMN -
PiMo -