ENST00000439483.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000439483.1 |
Source |
Gencode19 |
Same with |
lnc-APOC3-4:2,NONHSAT024351 |
Classification |
intergenic |
Length |
369 nt |
Genomic location |
chr11+:116510197..116525906 |
Exon number |
3 |
Exons |
116510197..116510254,116523615..116523770,116525752..116525906 |
Genome context |
|
Sequence |
000001 CCATGGACAA AATGGGCCCT CAGTGACTAT CCGATGCAGG GCCAGGCACT GAATGCAGAT GCATATACTG GAGCTCAGAG 000080
000081 GATTTCAGTG AGTTACCCCG GCCACAGCCA GTGAGCAGCG ATGTCAAGAT GTCTTGAATC CTGGGCCTCA GCTGCAAAGC 000160 000161 CGTAACCAGT CCTCTGTGTT CCCATGGGCC AGTGCTTTAC AAAGGTCCTT GCAGAGAATC ATGCCAGGTT AGGCTGGTGG 000240 000241 TCCCAGAGGA GGATAAGAGG CTTATGGAGC AGAGTTGCCT AATCAGGCCC AGCCAAGATC AGCAGACCCT CAACCAATAC 000320 000321 ATAGACACAC GAACCAGATA AATGGTTTTG TTATTTGCCA CTGAGAAAT |
Predicted Small Protein
Name | ENST00000439483.1_smProtein_263:340 |
Length | 26 |
Molecular weight | 3025.3338 |
Aromaticity | 0.04 |
Instability index | 82.1 |
Isoelectric point | 5.87445068359 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0314432079138 |
Amino acid sequence | MEQSCLIRPSQDQQTLNQYIDTRTR |
Secondary structure | LLLEEELLLLHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |