ENST00000439707.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000439707.2

Source

Gencode19

Same with

NONHSAT033470

Classification

intergenic

Length

2521 nt

Genomic location

chr13+:44482863..44604597

Exon number

5

Exons

44482863..44482912,44493521..44493569,44596611..44596804,44600959..44601030,44602442..44604597

Genome context

Sequence
000001 TCCATCAAGG TGTCACCAAT CTTCCAGTCT CCCAGGCAGA AGTTTTTGAG AGACAAATGG ATGGAAAAAC TTTTTGGCCC 000080
000081 TCTTCCTTAG GATCAGAAGG CAAAGATTGA CCAGACCAAG CCCTGAGACA CAGTGTTGAG AGCCAAGACA TAAAGTTGTG 000160
000161 AAGATTCAGA CCCAGAGCCC AGCAGGGCAC AGGCTGGAGG GGTGATGTGA GTGATCAGTA ACACCATGAA GACTCTGCTC 000240
000241 CTGGGTCAGG AATGCTTTTT TGTCCCTGTT TTTGGATTTT CCACCATGAT CAGCCAATGC AGAAAGAAAT CTAAAGGTGA 000320
000321 AGGAAAGGCA GCGTTCAGCA CTGAGCAAGT CCATGTTGGA GAAAGTTCAC AGGGAATTGG AAATCCTTGT CTTCGTGGTT 000400
000401 CCTGGCTCAG CAGGACCCCT GTGGGGCCTC TCCCTCTCTT GGGAAAGAGA TTGCTCTAGA AGGTTTACTA CACCAGTGAG 000480
000481 GAGAAGATGA GCGCAAGGGG GATTGGCCGG CTGAGGGCGA AATCAAGACT GGAGCCAAGT GCGCTGAGCT CTCACATGAG 000560
000561 GTCCTTTGCT CCTGTTCCCT GGAGGCATAA GTGGCTGGGG TAGAGAGAAG CAGGGGTATT TCTTCTGTCC TTTCTTGCTT 000640
000641 AGGGATTGGG GGTGGAAATC TCCCCGCATC TAAGGAAATT TGAAAAGACA AACTATGGCT GCTTCTTCAA GCAAACCACC 000720
000721 TCACCACACT ATCCAGGGGA TAAAACCCGC TTGCTGCTGC TAAATTATGC CAAGAGAGAA CATTCTGATA TTTCTCCTCA 000800
000801 ATTCTAGGCA TGACAGCGTG ACTTGGTGCT TAAAGGCATG GAGTTTTGAG TTGCAGACCT AGGTTTGAGT GCTGAATCTA 000880
000881 CTAGCTTCAG GGTGTTAAAA AAGTTTCTTA ATCTCTCTAA ACCTTATTTT TCTCAAAGAT AAAAAACTGG GTGTAGTTGT 000960
000961 GAGTATAGTG AATGCACATA GTATGTGCCT TTGGCATGTT AATTCACTAT TATTCTGGAC ATAATTTCTC CTAAGAAAAA 001040
001041 GGATGAACTA ATTGCAGGGC CTAGCCTAAG CTCTGAGAAG TCATTCGTTA TAGCATTTCA GTCCATAGTA AACAAGAAGA 001120
001121 AATGAGGTAA AGAGTTTAAA CCAGGGAAGG CATAGCTGTG GTCACCAAAC AACCTGTTAA AGGCGAGCTG TAGGCACCAA 001200
001201 AAAACCTATT ATGGACTGAA TTGTGTTCCT CAAATTCATA TGTTGAAGTG CTAACCCCAA GTACCAAATG TGACTGTATT 001280
001281 TGGGGATAGG GTCCCTGAAG AAGTCACTCA GCTGGAAGGA GTCATATTGG ATTAGGTGTT GGGAATTGGC TGGCCAAGGG 001360
001361 AGAAATCAAG GCTGGAACCA AGTGCTGAAC TCTCACATCA GGTCCTTTGC TCCTGTTCCC TGGACCCTAA TCCAATATGA 001440
001441 CTGGCATCTT TATATGAAGA GGAAGAGGCA CCAGAGGGTA CACACGCAGA GAAAAGGCCA TGTGTGGACA CAGTAAGATG 001520
001521 ACGGACATCT GTAAGCCAAG GAGGGAAACC TCAGAAGAAA CCAGCCTTGC CTGCACCTTG ATCTTGGAGG TCCAGTCTCC 001600
001601 AGAACTGTGA AAAAAATGAA CTGGTGTTGT TTAAATCCCC CAGTCGTGGT ATTTTGTCAT GGTGGCCCTA GAAGACAATA 001680
001681 TACAACCCAA AGGAATATTC TTTCCACTTT CTCCCTCTTC CACTTTATAG TTTTTTCTCC TTCGTTTCTT TCTTTTTCTC 001760
001761 TTTTACTTTC CTTTTCTTCT CTTCTCTTTC CTCTGGTTTT TAATTTTAAT TTTAATTTTT GGCCTTCCTA TACCTCCATT 001840
001841 TGCCTCTCCA GGAAGCTGAA TTCCAGACAA TTAATCATTC ATCTCATCAG TTCAGCAAAG CAAATGCCCT CAATGGTTTC 001920
001921 TTTTGTGATT CGATTATTAT GGGATCAGAA TGTATCTTAT TCCTCTGGGA AAAATGAAAC ATAAAAATTT CAGAAATAAG 002000
002001 GTTTTGGGCC AGCTTCATTG GTTTTAAGAG AAGGAAGGGA GGAGACTCAT GCAGGTTTGA CGCTGAGCAG CACCATGTGG 002080
002081 TTGGGCCTGG CAGGCACTCG AGGCTTTAGG TCTTGGTTTG AATCCAGACT AGAAAATCAT TACTTATTAA AAGCCTTGAG 002160
002161 GATATGGGTC TAGGAAAGTC TATGTGAAGA GATAATAGTT TGGAAAAAGT TTTGCAGAAC TAAAGAAAAG TTTCCACAGT 002240
002241 TACCTTTTCT GTCCTAATGT AGAGCATCTT TGTTAACTAG GTCTTGGATC AATCCAAGCT GTGTCTGAGA ATAACCATTT 002320
002321 ATAATTTCTC ACTGGCCAGC ACTAACACCC TTTAGAAAAG GAACTCAAAG CAGCCCTAGC AGCCAGAGTC ATGCGATCAT 002400
002401 GGTGGGAGTA CAGCTCCTCA CCAAGGTCAG CTCCTCAGTG AAATCCATGC CTTCTGGAGG ACTGCTTGTA AATAAATATT 002480
002481 AAGCACAACC ATTAAAAAAT AATTTGGCTG TGACCATCAA A
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Predicted Small Protein

Name ENST00000439707.2_smProtein_1499:1609
Length 37
Molecular weight 4037.6389
Aromaticity 0.0
Instability index 99.9555555556
Isoelectric point 5.05377197266
Runs 6
Runs residual 0.0137917637918
Runs probability 0.032709179768
Amino acid sequence MCGHSKMTDICKPRRETSEETSLACTLILEVQSPEL
Secondary structure LLLLLLLLLLLLLLLLLLHHHLHHHEEEEEEELLLL
PRMN -
PiMo -