ENST00000443389.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000443389.1 |
Source |
Gencode19 |
Same with |
lnc-WDFY4-3:2,NONHSAT013293 |
Classification |
intergenic |
Length |
1053 nt |
Genomic location |
chr10+:50329889..50359019 |
Exon number |
6 |
Exons |
50329889..50330321,50349298..50349412,50350975..50351133,50353827..50353945,50356652..50356708,50358850..50359019 |
Genome context |
|
Sequence |
000001 ATTACATGTT ATTCTTAACA CCTGCCACTT CTCTCTTCCC ACCTCTATCT GCCTTATTGA ACTTCATCTT TCCTTCATTC 000080
000081 TCTTCAACTT CCACTTCTTC TTGTATGGTC CTGTTGATGC CATCTTGTTT CCGTCCCCAG ACTCATCATC TTTACCCTCT 000160 000161 GTCAACTGAG TTCCCACCCT GGTTCTCTCT CAAGATCTTC CTCTCATAGC TTTCACCCTT GGTAAACAAT GAGGACACAT 000240 000241 CTCAAAAAGA ATGATGTAAT TTAATTGCCT TGAGTTGGCT GGGCCATCAT CTATTATAAA GTGCTCTTAA AATTAAAGCT 000320 000321 AATTTAATTC TGAAGAACTA AGGATTAAGA AGTTAAGAGC TGGGGTTCTT ACAATATGGC TTGCAGACTA CAAGTGTGAA 000400 000401 CTGAGGAGGT CCCCAAAGTC ACTTCTTACT AAGTGAAAGC GGTGTAAATG GCTCTTATCT GAACCACAAT GAATTCACAT 000480 000481 ATTCAAGTTG GCTTCTTCGG AAATTTCAGG CCACAAATGG CAGTGATGCG ACCAGGAGCA GTAACACGAT TACAAGTCGC 000560 000561 AATTTAGGAA GGGTGCTCCA TCATCATTTC ATGATTCTCA CTACAGCCCA GACAGGTGGG CAGAGCAGTG TTCTTTCCCC 000640 000641 TTTAATGAAT GAAGAAGCTG AGCCTCAAAC AGATGAGGGG GCTTCCTGGG TTCACAGAGC TCTAAAGGGC TGAGCTGTAG 000720 000721 ATCCACGGCC ACCATGATGA GCTAAGAGTT TCTGGATTCA GTGCCTGCTG TTGCTCCTGG AGATTTGTAT CCTGATTGAA 000800 000801 GGCTGGTTCC ATATCTGTTC ACCCAGTCAC CTTTAAAATT AAGTCCTGGG CACAAATCAT TAGTCTGGCA AGTTACATCA 000880 000881 CTGTGCCACT TCCATCCGGA CAGAAGGAAC CCAGGTCAAG GCTGACAGGA GGAGCAGGAG CCGTCAATGA GAGCAGACCT 000960 000961 CAGAAGCCAA CGGAGGTGAG AAGAGCACCA TCCACAGCCC CATCCTCTGA ATGCTGTGGG AAGAAGTCCA CAAAATACCA 001040 001041 CCCCTTGGAG TCA |
Predicted Small Protein
Name | ENST00000443389.1_smProtein_5:208 |
Length | 68 |
Molecular weight | 7572.8998 |
Aromaticity | 0.164179104478 |
Instability index | 65.0104477612 |
Isoelectric point | 7.85711669922 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0489794607442 |
Amino acid sequence | MLFLTPATSLFPPLSALLNFIFPSFSSTSTSSCMVLLMPSCFRPQTHHLYPLSTEFPPWF SLKIFLS |
Secondary structure | LEEELLLLLLLLLHHHHHHHHLLLLLLLLLLLLEEEELLLLLLLLLLEELLLLLLLLLLL EEEEEEL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiii |