ENST00000444388.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000444388.1 |
Source |
Gencode19 |
Same with |
lnc-CRYBA4-1:31,NONHSAT084537 |
Classification |
intergenic |
Length |
918 nt |
Genomic location |
chr22+:27068730..27130418 |
Exon number |
5 |
Exons |
27068730..27068950,27089644..27089799,27113216..27113422,27122607..27122757,27130236..27130418 |
Genome context |
|
Sequence |
000001 CACCGGAAGT CAATGAAGCG GGTCTTTCCT ACGCTAAAAA CCACTGAGTG GAGTATTTAG TACACAGGAA GTCGGCCAGA 000080
000081 GAAACATTTC TCATATTTGA AGGCCGGAAA GAGGGACATT TCTGACACCG GAAGTCAGTG AGAGGACTCT TTCCCACACA 000160 000161 GGAAGTCAGC TAGAGAGCCG TCTCCCCTCT CTGGAGCCGA GAGAGGCCGG TTTCCCCCAC CATAGCAGGG CTGGGAGAAA 000240 000241 GGGATGGGGA GAGTCCCTCC TGCCACTGAC CCAGGATGGA TAAAAGTACC CCTTTCATAG AAGGAAGAAA ATGGGAACAA 000320 000321 AGGTGCTGCT GATCATCTGA GGTTGCCTGC ATGGCAGTGA AGAACATGGA CCTTTGGGTA GCCCACCTGG GAGGAATTTT 000400 000401 CCAGAGATCA CTGTCTGATG ACCCTGTCTT GGAATTGGAG CCATGCAAGT TACACTGACC ACGTTTGGGT TGGGATATTG 000480 000481 AGGAGGTTAT GGTTAAAAGC ATACGATGGG AGATCATATT GTACTTGCGA GTGAGACCCG GCTGGAGGAA TGTTTTAATT 000560 000561 CTTCGGAAAT ACCAAGTGGT CTCTACAGAA CACTGAAGAT TCTGCTCTCA GGGTGTTGAT TGACGTCTGG AAGGCAGAGA 000640 000641 CTCGTGGATT AGCAAGCATG TGTAAGAAAG TGCTCTGGAT GCCACAGGGT GGTAATTTGT GCATGGAAAA TGGCTGGGGT 000720 000721 GAAGAGGAGA CTAGGCTTTA TCTTGTCAGG TGGTCTCTGT GGTTCCAGTA CCCATGAGGG AGCTGAGTCT GAAGGACCTT 000800 000801 GGAGCTTTGC AGATATAAAG AAAAAGCTGA TTTAAGCTTC CCCAGTTTTC CCTGCCCCCT TCATGAAAGA ATTACAGCAT 000880 000881 ATAATAAGAA AAATCTGGAG AAACACTTAT TTTTATGG |
Predicted Small Protein
Name | ENST00000444388.1_smProtein_488:595 |
Length | 36 |
Molecular weight | 4353.1905 |
Aromaticity | 0.114285714286 |
Instability index | 66.52 |
Isoelectric point | 10.9467163086 |
Runs | 6 |
Runs residual | 0.00968523002421 |
Runs probability | 0.0289259848083 |
Amino acid sequence | MVKSIRWEIILYLRVRPGWRNVLILRKYQVVSTEH |
Secondary structure | LLLHHHHHHHHEEEELLLLEEEEEEEEEEEEELLL |
PRMN | - |
PiMo | - |