ENST00000447167.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000447167.1

Source

Gencode19

Same with

lnc-KLHDC9-1:1

Classification

intronic(AS)

Length

1109 nt

Genomic location

chr1+:161054255..161057361

Exon number

3

Exons

161054255..161054602,161054727..161054818,161056693..161057361

Genome context

Sequence
000001 ATCCTGCCTG GAATGTCACC CCCAGCATCC TTCCCCACCT TACCCCAAGA CTTGAAGACA TATTAATCTC AGGCTCAAGG 000080
000081 TGGAAGTACC CAGAGATGAG GTCACTGTCC CTCCAGGTGA TGGGAACTTG CCATTAAGGA CTCCCCAGCA GAACAAAACA 000160
000161 AATGTTCCCT CTCCCCTTGC TCCTCAGGTT CCTACTAAAA GGACTGCCAA CCTTCTCACC ACTACCCCCA GCCACTCCCC 000240
000241 TGGGCCCCTC AGCAGCTCTG GCCCCCCAAG GAGGCCTCTC CCTGGGAATC TCTGTCAGGG CTCTGCTGCT GCCACCACCA 000320
000321 GAAAAACCAG CTCTGGCTCC AGGCCTGGCA ACAATCTCCA CCGAGAGCTG GAGTATGTGG GTGAGTCTGG GGTGAGAAAG 000400
000401 GACCTAGGAG GGACGCACCG AAGCTCACCA TCCAGGACAG CCAGACCCAG TGACCCTTCC AACACCCCAG CACCCCACTT 000480
000481 CAGCCAGGCC TGGACCATCA CAGAGTCATC GTATTTCAGA GCTGGAAGGT CAATAGAGAT CATCTGGTCC TAGCTCTCGG 000560
000561 TCTACTGAAG TCTGGTTTCA TCGCTGCCCA AGGTTACCAA ATAGATTAAT AGCAGAAACG GGATCTGGAC CAAGACTCCT 000640
000641 GACTTCCCAG TCCAAGGATT TTTTCAGAGA CATGAAACAT TCCAGGTTCC TGGGAGCCAT TAAGGAGAGT CTACACACAG 000720
000721 AAGAGCCAGA ATGGGGGTGG TAGTGGAGGT AGGACCATCT GATCCTCAGG CTAGGAGCCT CCAGCCCCCA GAGCAACCTC 000800
000801 AGCTCTGTGC AGGTTGTAGC TGCTGCAGCA GCAGCAGAGT GGCCTCCTAC CAGGTGCCAG CTTCCTGGGG CAATCTGGAG 000880
000881 CCAGGCTTCC TCCCTTACTG CCAGGCATTG CATGAGGTCT AACTAGAAGG GGGTCTCCTG TCCCCTTCCC TGGGCTTCTC 000960
000961 TTAGTAAGAA CAGTTTTGCC ATCATGGAAA AGAAAGGCAA GAACCATGTG ATGCAGTCAC CATTGCATCT CCAGCATCTA 001040
001041 GTATCCAGGT TGTACCCAGT GTGCACTCAA ATGTACTATT CTTCAATGAA CTTAGAGTGA GAACACCAA
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Predicted Small Protein

Name ENST00000447167.1_smProtein_161:394
Length 78
Molecular weight 7939.4648
Aromaticity 0.0649350649351
Instability index 58.1714285714
Isoelectric point 9.98431396484
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0406208347385
Amino acid sequence MFPLPLLLRFLLKGLPTFSPLPPATPLGPSAALAPQGGLSLGISVRALLLPPPEKPALAP
GLATISTESWSMWVSLG
Secondary structure LLLLHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLEELEEEELLLLLLLLLLLLLL
LLLEELLLLLEEEEELL
PRMN -
PiMo -