ENST00000447167.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000447167.1 |
Source |
Gencode19 |
Same with |
lnc-KLHDC9-1:1 |
Classification |
intronic(AS) |
Length |
1109 nt |
Genomic location |
chr1+:161054255..161057361 |
Exon number |
3 |
Exons |
161054255..161054602,161054727..161054818,161056693..161057361 |
Genome context |
|
Sequence |
000001 ATCCTGCCTG GAATGTCACC CCCAGCATCC TTCCCCACCT TACCCCAAGA CTTGAAGACA TATTAATCTC AGGCTCAAGG 000080
000081 TGGAAGTACC CAGAGATGAG GTCACTGTCC CTCCAGGTGA TGGGAACTTG CCATTAAGGA CTCCCCAGCA GAACAAAACA 000160 000161 AATGTTCCCT CTCCCCTTGC TCCTCAGGTT CCTACTAAAA GGACTGCCAA CCTTCTCACC ACTACCCCCA GCCACTCCCC 000240 000241 TGGGCCCCTC AGCAGCTCTG GCCCCCCAAG GAGGCCTCTC CCTGGGAATC TCTGTCAGGG CTCTGCTGCT GCCACCACCA 000320 000321 GAAAAACCAG CTCTGGCTCC AGGCCTGGCA ACAATCTCCA CCGAGAGCTG GAGTATGTGG GTGAGTCTGG GGTGAGAAAG 000400 000401 GACCTAGGAG GGACGCACCG AAGCTCACCA TCCAGGACAG CCAGACCCAG TGACCCTTCC AACACCCCAG CACCCCACTT 000480 000481 CAGCCAGGCC TGGACCATCA CAGAGTCATC GTATTTCAGA GCTGGAAGGT CAATAGAGAT CATCTGGTCC TAGCTCTCGG 000560 000561 TCTACTGAAG TCTGGTTTCA TCGCTGCCCA AGGTTACCAA ATAGATTAAT AGCAGAAACG GGATCTGGAC CAAGACTCCT 000640 000641 GACTTCCCAG TCCAAGGATT TTTTCAGAGA CATGAAACAT TCCAGGTTCC TGGGAGCCAT TAAGGAGAGT CTACACACAG 000720 000721 AAGAGCCAGA ATGGGGGTGG TAGTGGAGGT AGGACCATCT GATCCTCAGG CTAGGAGCCT CCAGCCCCCA GAGCAACCTC 000800 000801 AGCTCTGTGC AGGTTGTAGC TGCTGCAGCA GCAGCAGAGT GGCCTCCTAC CAGGTGCCAG CTTCCTGGGG CAATCTGGAG 000880 000881 CCAGGCTTCC TCCCTTACTG CCAGGCATTG CATGAGGTCT AACTAGAAGG GGGTCTCCTG TCCCCTTCCC TGGGCTTCTC 000960 000961 TTAGTAAGAA CAGTTTTGCC ATCATGGAAA AGAAAGGCAA GAACCATGTG ATGCAGTCAC CATTGCATCT CCAGCATCTA 001040 001041 GTATCCAGGT TGTACCCAGT GTGCACTCAA ATGTACTATT CTTCAATGAA CTTAGAGTGA GAACACCAA |
Predicted Small Protein
Name | ENST00000447167.1_smProtein_161:394 |
Length | 78 |
Molecular weight | 7939.4648 |
Aromaticity | 0.0649350649351 |
Instability index | 58.1714285714 |
Isoelectric point | 9.98431396484 |
Runs | 11 |
Runs residual | 0.00677583286279 |
Runs probability | 0.0406208347385 |
Amino acid sequence | MFPLPLLLRFLLKGLPTFSPLPPATPLGPSAALAPQGGLSLGISVRALLLPPPEKPALAP GLATISTESWSMWVSLG |
Secondary structure | LLLLHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLEELEEEELLLLLLLLLLLLLL LLLEELLLLLEEEEELL |
PRMN | - |
PiMo | - |