ENST00000449673.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000449673.1 |
Source |
Gencode19 |
Same with |
lnc-MEIS1-2:3,NONHSAT071218 |
Classification |
intergenic |
Length |
905 nt |
Genomic location |
chr2+:66554493..66556116 |
Exon number |
3 |
Exons |
66554493..66554522,66554794..66555464,66555913..66556116 |
Genome context |
|
Sequence |
000001 GATCAGCCTA GGCCTATTAA TCAGTCTAAG TTCCAGCCTG GACTGAGCGA GTCTCGAGAA AGCCAGCTCC TCTCCTTTTG 000080
000081 TGCTGAAGGG CAGGGGAGGG GAACCAAGAT TGAGGATCAA GGCTGCGCTG CTTCAGTGCC TTCGTGGACA ACCAAATTCC 000160 000161 AGTTGCCAGC TTTCTTCGTA GGCATCTGTT CCTCACAAAA TGGCTTCAGC GGAACATAAC TTTCCAAAAG AAGAGCACTC 000240 000241 CAGCCCCTGC CTCTACGTTC ACCTATCTTT CTGAGTCAGC TTTTCAGCAA CAAATGCCAC CAAGCTAGTT AGCTGACAGT 000320 000321 ACCAACTACA GAAGGAAATC ATGTTGGAAA TGTCACTGAG GCCGGGCTGC CTCCCCGCCT GCACCCACAG CCTCTTTCAT 000400 000401 CTCACCACCC ATTCCTTCCA GAGCGGCAGA AGGAGACTGG GTGGCAAGTG TATTTAGGAT TCTGAGGAAA ATGTCTGTTA 000480 000481 AGTCGACCTT GGTAACTTAA CTGAAACAGT ATATGTGTAA ATCCATTGAA AATCCCTGGC CTTTTACAAC TTCTGTCCCA 000560 000561 ATGGAAATCA GATCACAGGA CTGTTTACAA GAGACCACGA TTCATTTGGA TAAAGACCCA TGACAGCACG GCCCAGGATT 000640 000641 ATTTGAAATT TTAGTAACCT AAGCTTTAAA AATATTCTAA AAGCAAAATA ATGAGGGGCA GCCACTTAGA AATAACGACT 000720 000721 GTGAACAAAT GACCTCCACT AGAAGACTCC TTAACAAGTC GGAAAGAAGC AAGGAAAGGG GAAGATCATA GTGAGGGTGG 000800 000801 ACAAGACCCG AGGCAGAGGA ACCTGAAGCC CGCCATTACC AGCGGAGCAG CTTCCGGTTG TTCACTTGAC TTCTCTCTGT 000880 000881 CTCTGCCTCC AGCACCGGTG ATCCA |
Predicted Small Protein
Name | ENST00000449673.1_smProtein_512:622 |
Length | 37 |
Molecular weight | 4191.7389 |
Aromaticity | 0.0555555555556 |
Instability index | 78.0138888889 |
Isoelectric point | 4.58123779297 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0091099502864 |
Amino acid sequence | MCKSIENPWPFTTSVPMEIRSQDCLQETTIHLDKDP |
Secondary structure | LLLLLLLLLLLLLLLLLEEELLLLHHHLEEEELLLL |
PRMN | - |
PiMo | - |