ENST00000457535.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000457535.1 |
Source |
Gencode19 |
Same with |
lnc-PROK1-1:1,NONHSAT005115 |
Classification |
antisense |
Length |
817 nt |
Genomic location |
chr1+:110950147..110958896 |
Exon number |
3 |
Exons |
110950147..110950576,110954795..110954915,110958631..110958896 |
Genome context |
|
Sequence |
000001 GTTCCGCTCA AGTTCCTCCG CCGCGACCTC AGGACAGGCC GAAGAGGCGC GCACTACTCA CGTGTCTTCC AAGTGCTGCT 000080
000081 CCAAGGTCGC CTCCATCCCA CCCACCGACC ACTCCGGCTC AGAACCCAGC GGCACGGCAC GTCCTTCTCC ACCACAGGCC 000160 000161 TCAGTCACTT GACGCGAGCG GGGCGTGGAC CGTAACGGCG CCTCCAAAGG GACAAAATTG ATCACGGTGC AACGTCCGCG 000240 000241 TTCTTTACTG GAAAACATCA CTGCGCTTCC GTCGCACAGA GCCTGACGAA GGCTTGGGCT CCCCGCGCGG TGACCGTCGA 000320 000321 GGTGACCTGC ACCTGGCTCC ATGGCGGAAC CGGCCGGCAC GGATTATTCC CCTCTCGGGA GAGGTCTGCA GCCGGGCCTC 000400 000401 AGTGCTTCAG TTCGTGGCCT GGCATTTTGT GAAGAGTGTC TTCATCTCTG CATCCCTAGT GCAACAGAGC ATGACAAAAA 000480 000481 TTCAACAAAT ATTTATTGAA GAGTCTTGAT GTCTTTTGGG AAAGGAACTC TATGGTTACC TTTACTCTAA GATTAGATGG 000560 000561 GTGTTACTGA TTCTTACCTC AGAGAAGAGA ATGTCATGGA GACAAAATGA CCTGCTTAGA GTTCTGCACC CCCCAGCATG 000640 000641 GAGAGCAGAG CGCAAAGATT TCTTCCGGAC TCCCACATTC CCCTTGGAAT CCAAGAACTG GTCTACTGTC ACAACACTTT 000720 000721 AGTACCCTCT TGTAAGCCTG TGGACAAATC CTCTGATGCC TTGATACCTC GGTTTTCCCC CACTATAAAT GGGAAGATAA 000800 000801 ATTCACTAGA AACAGTA |
Predicted Small Protein
Name | ENST00000457535.1_smProtein_590:721 |
Length | 44 |
Molecular weight | 5229.93 |
Aromaticity | 0.139534883721 |
Instability index | 42.9209302326 |
Isoelectric point | 10.7805786133 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0399348928761 |
Amino acid sequence | MSWRQNDLLRVLHPPAWRAERKDFFRTPTFPLESKNWSTVTTL |
Secondary structure | LLLLLLHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLL |
PRMN | - |
PiMo | - |