ENST00000457957.2

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000457957.2

Source

Gencode19

Same with

NONHSAT002272

Classification

antisense

Length

636 nt

Genomic location

chr1+:33772972..33791644

Exon number

3

Exons

33772972..33773050,33780291..33780424,33791222..33791644

Genome context

Sequence
000001 ACACGTAGTA CATCACGCTC TGGCCCGCCA TGAAGTGCTG CTCCGCCGTC TCCAGGAAGC GCTCCAGGTA CTTCTCCAGT 000080
000081 GACCCTCGCC TGCTCCTCCG TCACGGGATC ATTGCAGCAG CACTCTTCAT GCTCCTGGTC ACTTCCTCCA CAACCCCAGA 000160
000161 GTCATCTCAT AACAAGTCAG CCTGCCTTAA CAGTTTCCAT GTCACACAAA CAGTTCTTAG ACTAAGAGGA ACTGGACACC 000240
000241 AGGAGCCTCA TACCAGGACT GCCCAGCCGA GCCACTCGAT TCCTGACCCA CATGGCCCTT GAGATGACAA GTGATTGCTG 000320
000321 CTTAAAGTCA CTGAGTTCTG GAATAATTTA CATCATGGCA ATAGGTAACT AATGCAGATT CTGGTACCTG GAAAAGGAGT 000400
000401 GCTGACATCA AACAGCTCTA TAGATGTGGG CGTGGCCTCA GAACTGGCCA CAGGCAGGAG CCAGAAGGAC TCTGTGGAAA 000480
000481 GCGTGAGTGT CTAAGGTGCT TTGAGAGACT GTATATAGAA GTCTCATGGC CTTTAGGGAA GCTGCTGGGG AGGCCTAAAG 000560
000561 GAAAGTGAGG AAACTCTTAG TGGAGATTGG AAGAAACAGG GTCTCTGTTA TGAAATAAAA GAACATTTTG TAAAAA
[back to top]

Predicted Small Protein

Name ENST00000457957.2_smProtein_29:301
Length 91
Molecular weight 9919.2341
Aromaticity 0.0444444444444
Instability index 50.0955555556
Isoelectric point 10.4229125977
Runs 11
Runs residual 0.0176366843034
Runs probability 0.0238152591094
Amino acid sequence MKCCSAVSRKRSRYFSSDPRLLLRHGIIAAALFMLLVTSSTTPESSHNKSACLNSFHVTQ
TVLRLRGTGHQEPHTRTAQPSHSIPDPHGP
Secondary structure LEEEEEELLLLLEEELLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLEELLEEEEE
EEEEELLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -