ENST00000468859.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000468859.1

Source

Gencode19

Same with

lnc-ALG1L-2:1

Classification

intergenic

Length

1996 nt

Genomic location

chr3-:125581417..125606178

Exon number

2

Exons

125581417..125581956,125604723..125606178

Genome context

Sequence
000001 TAGTTACTGA TTCTAGGGAA CAATTGGGTA GAAAGAGATG GACTCCCTGT GTTTGAAATT CAGAACTCAA GCTTGGCTCT 000080
000081 AAGTGTTTCC TTGCTTTGCT GTGCTCCAGG GGAGTCCTTG AGCAGAAGGA AGCAAGTTGC CTGAGATTCT TCAAAGCCCG 000160
000161 CAGCCCTTTT GGAGGTTAGA TGGTTATTCT CAGAGCCTTT ATGATGCATA ATAAAGACCT AGCTTGGACC AATATTAGGA 000240
000241 TGAGTTATCT TGCTATTAAC ATTCTTTTAG GTAGAAGTTG CTGGTCCCAT CTTGCTCACA ATCCTCCAAA GTTTGAAAGT 000320
000321 TATTTTCCAG GAGACTTGGC TTGCACTGAG AGCTGCCCTC CCACCCTCTC TCCAAATTTC CTCTTGGGGG TAGCCTAACA 000400
000401 AGGTGCTGTC ACAGACCCTT GTCGGCCACG ATGACCCCAC CCAGACCATC CCTCTGCTGT TTCACTCTTT GATAGTCTCT 000480
000481 GGAGCTCTCT GGGGAGGGGT GAGACCTGCC GTCTAGTTTG TATGGTTTGC CCAGGTCTTA CAGTCATGGC TGGCTGCCTC 000560
000561 TCTCTGAGAA CTAGAACTCC TGAACTTGGT GAAAGACCTC AGCCATCGAT CATGTTGAAT TATCGGGGAC ACTCATTTGA 000640
000641 AATCCGAGCC TGTTCCAGAT AGACTCTCTC TCTTTCTGCC CTGACCGTGA GAGAAGCCCT GCTGGACGGT GGAGACACTC 000720
000721 GTGGGCTGTG AGCAAGGGAT GCAAAGGCTG CCGGGAATCC CATCTTTCCA GCATCATCTG CCAAGGCACA TTAGTTCCTG 000800
000801 GGTATCTGGA TGGGTTCTAG CAGCATTACT GTCATTGAAG GAAAAATTTT AGCCATATTA AAGGTTAATG CAGCAATCTC 000880
000881 CACATAGGCT GCCTGGAAGG GAAGCAGGAC AAGGTTAGGT TTTCCTTGTG ATGGACAGGA GGCAGGCGGC CCTCCCACAG 000960
000961 CCCTGCCTGG CAATACAGAT GTGTCCCCAA AAGGCACTGG GGGCCAGCTG GAGTGCTATG CCGAGGCGGA CTGACCCGGG 001040
001041 CCGTGGGTTC ACTCTGCTGG CAGCGGTTTC CCGCCAGCTC CTTGCAGAGT TGGCAGATGG CCCAGCCCCA CAGCAGGAGC 001120
001121 CGGGAATGGC AGAACGAGAC ACAACAATTT GATATCCACT TGCCAGATGA GCCGGGTGTC ATCAGTCGCC TGGCTCTATG 001200
001201 CCCAACCTCT TTTTGCATAA ACACTTATGG ATTCAGCCAA GAGGAAAAGC ACTCTGATTA TGAATTGAGC AGAAGGAAAC 001280
001281 AAAGTTCTGC AGATAAACAC CAATGAAACA AAAAACCACG AATAAGAAAA ATGACAGAAA AGGAGAACCT TCCCAGAATC 001360
001361 CTCCTGCCAG TGAACGGTCA CCAGAGCAAG AGCATGGAGT CCCTGGGTTT TGAACTGTGA GATAAGGAAG ATGATGAAAA 001440
001441 CCTCCCTAGC AGCCAGTTCT ACAGGGCCTG GAGCTGATAC GAAAAACCTC CCTTCTTTCC CAAATGGTCC CCAGCTTCCC 001520
001521 CGTTCACTGA AGGCCCTGCA GTCGGGAACA GTCAGGACTT TGCACCCAGT TGTTGTGGGT GTTTGGCCAA CCCTTCCTCT 001600
001601 TGTGTGATTC ATGGACCTGC AGCATTGCGT CACCTGTGAG CTTTTGGAAT TGAAGACTCT CAGGGCTCAC CCGGGAGGAC 001680
001681 CTGCTGGGCC AGAATCTGCA TTTTAACAAG ATGCCTGGGT GATCTGCATA CACGTTCAGA TCTGAGAAGT GCTGGTAGGA 001760
001761 GAGGCTTTAA GGTGGTAATT AGATCTTTTC TCCACCTACA AGAATCTTAG TTTCTTCATG TTAAATCTAT TAACTGTGGC 001840
001841 AATGGCATGG GGGTTATAAA ACAAAACAAA ACAAAACCCT TACATCAAGA ATGCACCCTG GTGTGTTATG GATGTGGGTG 001920
001921 AAATGAAATG TCTGGAATTT GCTTTAAAAT ATTGTAAAAT AGCAAGAAGG AAAAGAAAAG CGGGAACTGG AATGAG
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Predicted Small Protein

Name ENST00000468859.1_smProtein_179:397
Length 73
Molecular weight 8123.4812
Aromaticity 0.111111111111
Instability index 99.6805555556
Isoelectric point 7.77496337891
Runs 8
Runs residual 0.0298053527981
Runs probability 0.0377031443208
Amino acid sequence MVILRAFMMHNKDLAWTNIRMSYLAINILLGRSCWSHLAHNPPKFESYFPGDLACTESCP
PTLSPNFLLGVA
Secondary structure LEEHHHHHHHLLLHHHHHHHHHHHHHHHHHLLLHHHHHLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLL
PRMN -
PiMo -