ENST00000484892.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000484892.1
Source	Gencode19
Same with	lnc-VGLL3-6:3
Classification	intergenic
Length	7308 nt
Genomic location	chr3-:84687557..84918726
Exon number	21
Exons	84687557..84688363,84693364..84693437,84715551..84719007,84720735..84720854,84721772..84722056,84732760..84732829,84734791..84734931,84744516..84744666,84744861..84745033,84745309..84745492,84795196..84795488,84838789..84838923,84841319..84841442,84903093..84903166,84908966..84909074,84911874..84911972,84912367..84912587,84912857..84913156,84917749..84917819,84918054..84918175,84918429..84918726
Genome context
Sequence	000001 GGTCAGGAGA TTGAGACCAT CCTGGCTAAC ACGGTGAAAC CCCGTCTCTA CTAAAAATAC AAAAAAATTA GCCGGGCGTG 000080 000081 GCGGCGGGCG CCTGTAGTCC CAGCTACTTG GGAGGCTGAG GCAGGAGAAT GGTGCGAACC CGGGAGGCAG ATTTTGCAGA 000160 000161 GAGCCGAGAT CGTGCCACTG CACTCCAGCC TGGGCGACAG AGCAAGACTC CGTCTCAAAA CAAAAAACAA ACAAACAAAT 000240 000241 ATGGAGCATT CTGATATGAA TAAGACACTT GCTCACTTCT CAATTCCTTG GTGTCCAGCT CTACAAGTGT ATATAGACTT 000320 000321 CCAAAGAATA TTTAAATCCT TTAACAAAAA TGCCACCTAA GAAAATATGA AATACTTCAG TCTGTCTGTC AGTGCTCACT 000400 000401 TCCTGTCTAG AAACTTTCAG GCTCCGGCAC AAATGAACCA TGTTCTTCGC CTAAGTCATT TATGGAACAT CTGCTTTCGG 000480 000481 TTTAGCATCA GTGTGCTATT AATCCAGGTC TTCCAAGAAA CAAATGCCAA GATGGTATTA AACATGAAAT GATTTTAATT 000560 000561 GTTTACATGC CTGAAAGTAA ATAAAGAGGG TGCCAGCTAA GGCTGAAAAA GTCTTCAGTG ATATAAATTT TACCACACTT 000640 000641 AAAGAGAGAG AGGAAAAGTT TAAGTGGAAG CTCCTACTCA GCCATGCTGT CTAAGGAAGA TTTGGCAAAA CCTTGAGCTA 000720 000721 AAGTCAGCCA ACGGAAATCC CACCTTTCTC CAAAGAATGG ATCTGCTTTA CTATCTTGCT TGGTCTTATT GCTTTGTGAC 000800 000801 CTAGTAATAT CTTTCTCGAG TGCATGAAAC ATCTCAGAAA TGCAAACATC AAGGAAGATA CTAATCCTTT CTTCCAGTTT 000880 000881 CTGTGTGAGG GTTGGAGGCT GACTTTGGTG GTGATCTTGC TCCAAATTAT AGAACTACAT CCTGTCATGA AGAGAAGTTT 000960 000961 GTCTTCTCGA TAAAGCCAAG TAGCTAACAG AGATGGTCAC CCCAATTACC AGATGGACAT AATTATACTT GAATGCTGAC 001040 001041 CTACAACATT TTGTGCTGTG CAGAGGCTTT GAAAATCAAA CAACTTTGAA AATACAAAGC ACCGCGTGGA TGGCCTCACT 001120 001121 CTGTCGCTCA GGCTGGAGTG GCACGATCTT GGCTCACTGC AGTCTCTGCC TCCTCCTCTT GGATGCAAGC AATTCGGCCT 001200 001201 CCAAGTAGCT GAGATTACAG AGAGGCTGAA AACTCAAGAA ATGTGGACTA AGTGTGTGGG CAAGTGTGTC ACTGCTGACT 001280 001281 AAAACTATGA ACAGACAGAG TCTCACTCTG TCATCCAGGC TGGAGTCCAG TGGTATGATC TTGGCTCACT GCAAACCTTT 001360 001361 GCCTCCCTGG TCCAAGTGAT TCTCCTGCTT CAGCCTCCAA AAGTAGCTAG GACTACAGCT AATCCTAGTG AATCCTCCAT 001440 001441 GAGGCCATTG TTCTGAATGG AAGAAGAGAG ATATATGCAA TAGGAAAAGG TGACGTGGAA TCTATGAGAG TCCCATGTTT 001520 001521 ATGTAGCATA TTGTGCCTAC TGTATCTATT CAGGAGGGGA TTCTTAATAT AAGAGATACA TTTACAAAAT TGCTTCCATT 001600 001601 ACCTACAAAC ACCATAAAGA AAAGTAACAG TGATGCATAT GGACAGAACT GCATCACCAG AAGTTAGAGG AGGAAAGCAT 001680 001681 TTCCTATCCA ACTTTAAATG CTGAGAATGA ATAACCAGGA AAAATGGTAC AGAGGACAAA ATACCAACAA AAGTCTCCAA 001760 001761 AAGTGATGTG AAGAAAATAA GGGGCTCATC ATTCTAAATT CTGCAGGAGA GCAGTAGAAG AAATCAAGGG AATCCCACAT 001840 001841 TATGTGGGAC TCTGCGACTG TATTGGACAC ATAGAATAAT CTAGGATAAT CTCTCTGTCT CAAGATCTTC AAATGAATCG 001920 001921 CAGCTGTAAC GTCCCTTTTG CCAGGGAAGG CAATATATTC ACAGATTCTG AGGATTAGGA ATGAGACCTC CTTGGAGCCA 002000 002001 TTGTTTAACC TTTCATAGGC TGGATAATAT AGTTTTGCAA ACTCAATTTG GGCAGCTGGA CAGTGATCAG GCAACTTTCC 002080 002081 GAGTCCCTGA CTCCCACCTA GACTGAGATT CCAATGCTAG GTGCCCAGAA GTTTCCAACC AATGCAAAGG TGGCAGCTGG 002160 002161 CAAGGGCCCT GTGCAGCAGT AAGGCGAGTC ATAGACTGAT GAGAGATCAC CATTGGGAAT GAGCTCCATT TGCCCACAAC 002240 002241 AGTGATCGGC TGATGGCTCC ACCCTCTACT TAGTCGCTTC TGTTTCCTGT CCCATGGATT CCTCACCCCA CACTAATGCT 002320 002321 TCCAGGAACA ACTTCTCAAA TAAATCACTT GCACATTTCT AGATGATATG AATTATATTC AGACCTGAAG AGAGGACAGA 002400 002401 AAAATTCTGG ACTTCAAACT CAATGCAATG ATTGGATAAG ACTTTCGGAG TAACTTCTTT TGGGATTGCG TAAGAGATCA 002480 002481 AGACTACAGA CTTTGAGGTA AAAACAACCT AGATTCGTGA GAAGAGGAAG AGTAAAAGAA CTGCAGCTTT CCTCCCACTC 002560 002561 TTAAGGTATA AATATGAAGT CTAGGTCATT TCGAGTTGGA GAAGCCCCAG CTACTTCATA AGTGTGATGC TAGTTTTGAA 002640 002641 TGTGCATTGA GGGACAGCTG GTGTTGAGAA AAAAGGAAAT TACCTTAATA CCAATAATTT CAGCACAGAT TGTCATGTGG 002720 002721 TTGGGAAAAT ATTTGATATG AAGACATTGA ATCCACCTTC TAAAGAATAA CAAGATATAT TCATGAATGG AAGGATTTGG 002800 002801 TAGGGTACAT GAGGACAGAT ATAAAACTGC ACAACCAATG TTACACAAAG GAGGTTTATT CTTCTTCACA AGAAAGTGAT 002880 002881 GTGTAGAGAT ATTCACTGAA TTATTGAAGA TTATATGTGG CAGAGTCAGC TTGGGGATCC AGGTTGTCTA ATCCAAAGAT 002960 002961 TGTTTAACCA AGAAACAAGG TCAAGGCATG TTCTTCGATG CTTGTTCATT AACAGCTCTG CGGGTGATGC TCCTAGAGAG 003040 003041 GTCTGATGTG TTGTGTGATG TTCTCACACA AACTATGTTA ATTTTTGATC AGTGATTGTG AGTTTTAATT GTGTTGAGGT 003120 003121 AACTAGAGAT TTGTTAAGTG GACGTTACTT CAAAAAGGTA AGTTGAAGCA GTAAATGTTA AAACCAAGGA ATCCCCCAAA 003200 003201 TTCTTGCCCT TTATTTTTTG CATGTTAATT CCAGAAAAGA AAAAAAAAAA AGCTTGTGGG TTAACGTGGT ATTTATGCAA 003280 003281 GGCTGCCAAT GTAAATATAA TTCTGTGATT TAATTTTTTA CTGGCATGAC ATTATATATA TGTATAAAAT GTGCATACAT 003360 003361 AATATATACA TATGTATATA TGTTATATAT TAGATGTGTA TGCATATATA ATATATATTA GATGTATAAA ATATATTACA 003440 003441 TATATAATAA AATATTAGAT ATGTATTATA TAGTAGTATA TATAAAATAT ATACATATCT AATAATACAT TATAGATCAT 003520 003521 GTATTAATAT ATACATATAT CTAGTATATA CAATATATAC ATATCTATTA TATTTATACA CACATACATA TACATATGTG 003600 003601 TATGTGTATG TCTGTGCCTG TGTGTCTTTT TGTCTTGCAA GCTCAATCTT TAAAAAGAAG AGTTCGAGGA GGGATGGAGA 003680 003681 AGGAAGAGAG TGATTATATA TACATATACT GTCCATGTTT GCTTAGCTAG TATGAAGCAG AATCTGGATT CAAATTCAAG 003760 003761 AAGTCTGATT CCCAAACAGC CACCCAATTA GGACCGCTTT GAAAACTCCG AGTCTTCTAT TTGATATAAG TATAGCTCAT 003840 003841 TGCCATGGAA ATAAACATAT GTTTCTTTTT TAAATTAAAA AAAATATTTT TATTTTGTTT TCAACATTTA GCATTTTTTT 003920 003921 GCATCAAAGT TCTAAGTAGC TGCATGTCTG TTTATAATGT GTATATTTGT TGTTTGTTTT TCTGTTTTGT TTCTGTATAG 004000 004001 TTTCTTTGTT TGTATCACTG GTAATTTAAT CCCTCATGCT ATGCTGTGGG ATTATGTACA ACAACACAAC TTCTTAGCCT 004080 004081 CTTCAAACCC TTTCACTGCA AGCTGCTTTT TTGTGCTTTT TGAAAGAAAA GGAAGAAAAA CACATTGCAT TTTCTTAAGA 004160 004161 TAAAATGATA CCTGCTTCTT CATTTCCTCC TACTCCTTCC TATTATCTTT TGTAGAAAGA ATTGCTGAAT CTATTGATAT 004240 004241 GTAATTTTCA TTTAATTCTC CAACATCTTA TTGCTATTTA AAATGGTTTA AGAAAACTGG CTTAATATAG CCAAGAAAAA 004320 004321 TTCTATAGTA ATACTTGTCT GTAATTTCTC TATATTTAAA TAAAATATCA TTTCTATCTT GGAGGTTTGA TTTGGCCATT 004400 004401 TAAAAATGCT AATGTTTTAT TGTTTTTTCA AAAAAATACT ACATGCATGC TCATAGTATA AACATCAATG TTTCATTAGG 004480 004481 ATATATAGTG AAAAGTCAGT AACTTTACAA CCTCTGTTTC AAACCCAACC AGTAATTTAA GTTGTTTTCA TAACAAAGTG 004560 004561 TTATTATTTA TCTTCTAATA CCTATAAAAT ATTTATTTAC TCCCCAAATT AAATAGAGTG TTGGTTCTTC AATGAAGGTA 004640 004641 TGAAGTTACT TTCAATTAAA TATGCAGTTT GATTAGAAGA AAAAAAAATC CATCAGATCT CAGCCAAGCT CTTTTGGATG 004720 004721 ATTATTTTTC TTCAAAATCA AATACACTAA AATTTCCAAA CAGTAACAGT TACAATGTTT CAGTTTCTTT TAAGGTAGCC 004800 004801 TGAACTGAGA CACATTAAGG TTTATATCTA ATTTCATAGT TCTGTTCAGT AGGAAATAAG TAAATTAGTT TAAAGGACTG 004880 004881 ATCCATATCA GGAGATCAGG ACTGGACAAA GTGTTAATTT ATCTACAGAT TTTACCAGGC AGATTGCCAA TATCCAAGTT 004960 004961 CATTAGACAG GTCCTAGGAC TAATAAGAAC TCTTGGGGGC TACAATGTGA AATACCTGAG TATATGAGTC AGGTAAAGAC 005040 005041 TTTAGAAAGT TTGGCTTCTA CTCTCATATT CCCAGGAGTT GAATAGATTG GAGTGGAAAA AATGTGGTCA AAAACTAGTG 005120 005121 ATTTTGGATT AGAAGTAGGG CATAAAGCTC CTATTATTGC ACTTGGGCAA TATTAACTGG ATTGCAAGAA ACTGTAATAT 005200 005201 GCAGAAACAG CATATTTCCC TTAGGGAGTA CATTTTGTTA AACTTAGTAT TCTTGCTACC TGTTTTGTTA CCTAAGCTTA 005280 005281 ATGGACCTGG CCCTAGACTT TAGCTTGGTG CATGGTGAAA ATTGACCTTA AGCAACTGCA GCATTGTCCA AATATTTGGT 005360 005361 TTCACATAGA CCAGTTTTGG TTCTTGTTTC TGTGTGACTT TGAGGGGCTC TTTAAGAAAT CCAAGGACAA GGTGCCACAT 005440 005441 TTATTAAGGC CCCGCCATTC ACAATGCATG ATGCTAGAGC CTGACAGTGC ACCATGCTAG AGACTGAAGA GACATAAAAA 005520 005521 AAAGAAAAGG CAGAGTTCTT GCTATCAGGT TCTTAAAATT TTCTTTGTTT TGGTTAAATT CTTGATTGGA TTTTTTCACT 005600 005601 AAATGTTTGG CCCTATTAAA AATAAGTAAA GAAAAAATGA AGGAAGAATG GAAGAGAGGG AGAATAGGAA ATGAATGAAA 005680 005681 CAAAGCCAAG TAAGAGATAC GTCTACTACA GACCTGCAAG TTGGCAGTGC TTGCAGAAGA CAGTTGACAT ATTCTAGCCT 005760 005761 GGTTCACATT TTCTGGTTAA CTTTTGAGCA TAGAATAAAG AATATAATAA AATGCTTTTT TTTTTTTTTG CACAATGAAC 005840 005841 TTTAAACAAA TCAGGAGAGT ATATTGGTAA TTTAGAGAAG TAGCAATTCT CATTAAATCT GTTTTTCATT GAATTATCAT 005920 005921 GCCCTTAAAA TTATATGATA GATTATTATC TTCGGTAGTA TTAGTTTAAA TAAGAATTAT ATACAACCAA AATATCAGTA 006000 006001 AGGCTAATTC TCTGAGACCA TAAGAGAACC AAGTCAATAT CCCCATAGCT ACATCATATT GATCATTCAT TTGATTTAAG 006080 006081 AAGAAAGAAG ACAAATATGT TAGTGAAAGG GAGACAAATG AGTATGTGCC TGGCCTGGCC AATTCCTGAC TCATTTACAG 006160 006161 AGGAAGCTAA TATAACTCTC TTACTCATTT TATGGGAAAT ATGATAGATC TGATTATATA ATTTATGCCT CCTTTCAGAC 006240 006241 TTCCTACACC CCACTAATTG TCTCTTCCTT TCTTTTCTCC ACCTTTTGCT CAGGTATTTG GCAGTTATTG CACTTTTTTG 006320 006321 GATCTTTTTT TTAAGGATGT TACTATCAAT CTTTTGCCTA CATCTAAATG ACTTACCTAT GAAGAAGATC CCATTTTTAG 006400 006401 CCTTAATATT TGCAAATTAC TTGAGAGATG GAGTCTCACT CTATCACCCA GGCTGGAGGA CAGTGGCACG ACCTCAGCTC 006480 006481 CCTGCAACCT CCACCTCCCA GGTTACTGAT GGATCCGTCC TAAATGCCAT CCATCTCAAG ACAGAGGCCC ACAGAAGTCA 006560 006561 ATGTATCTTC AAGATGGGAG TACCTGGAGA TGGCTGTAGA GACCATGTAG CAGGAAATGG TGACAGAGAA GAGCTGGGCC 006640 006641 TCTGGTACCA ACATGCTTCC CCCCCGTTAC AGCTATGCGG GCTGATAGTG ACGCAATGTG TGGTTTCAAT ACTTCATAGT 006720 006721 GTCTTACTTC ACCTCAGTAT AAAGTACTTT GAAAGCATCA AGGAAATGGT CCTCAAAAAA GGCTTATCCA GTCAGGACAT 006800 006801 CTGGTGCTGG CTCTGGAATG AGTGGATGAA GATAAGGCCT TCCAGTATGG AGGTGATAAA AATCAGGGAA GACAGGTAAT 006880 006881 CACAATGGAT GACAGACCAG GATTCCCAGA TATCTTGGCA TGGCTGGAAC AATGTACAGA TCAAACCATG TAAAACTTAA 006960 006961 TGGGTATAAA CCAACTCTTC ACTTTGGTCT AAAAAAGTCC ATTTGCATGG CTTCTAGTTA AAGGTGGACA GGCTCACTTT 007040 007041 AGAATCCTAT TATATACAAA GGATTTAGGG GGTTTAGTTC ACAATGTGCT AAAGCCATCT CACAGTGACC ATGGTATGAG 007120 007121 CTGTGTGATT TGGTTTAAAT ATAATAGAGA ATGAAGGACA AGGTTGAGGG TGGTGGTTAC AGTCCTGCCT GATTCTGTAG 007200 007201 TGCTCAGGTG ACCTTTGAAG AATGAAGAAA GAAGTCAAAA CCCCACACTA TTAAGACATT GGAAGACTGG GAATGTTTAT 007280 007281 TTTCTGAAGA ATAAAAGATG TAGGAAAC

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