ENST00000498997.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000498997.2

Source

Gencode19

Same with

lnc-AF131216.6.1-1:1,NONHSAT125046

Classification

antisense

Length

5850 nt

Genomic location

chr8-:11173374..11182938

Exon number

2

Exons

11173374..11179109,11182825..11182938

Genome context

Sequence
000001 CATTCTCTTC ATTCAAGTGT TTAACAGCAC ATTTATCAAA GGCAGCTCTC CGATGCAATG TTTAACGAGT GTCTTCTCAG 000080
000081 GAGTGTATCC GTGTCATTTA TTCTTCTCAT CCAGCTCTAG GTTGAGGAGC ATGAAACACA CACTGAAACT CCGGCATGGC 000160
000161 AGGACTTAAT CCACAGAACA AGGATTTCAT CCCATCACTT ATCTCTAAGC TCCACAAGGA GGTTTGGTAC AAAGCAATTA 000240
000241 AATCATCCTT CAGGCCACCC AGCTCCCAAT GTGGGTTTTC TCCCAAACAG CTACGCTCAT TTCAGTTATT AAATGTGACA 000320
000321 GTGGCTTTAA GTACATTGTC CCAGAAGTCC TAAACAGGAA GAATACTGTA ACCTCTCGTT TAAGAGATCA TGAACCCTGT 000400
000401 ACTGACTGTG ACGACAATCA CGAAAGTAAG CAAAGAGAAG TTCTGAGCAG TCACCATCCC TTCACAAATC AAAGCACTAA 000480
000481 AGCTCACACC CAGAACCTCA AGACCATCTA AGACCATTTC CCCACAATGC TAACTAGGGG ACACTTCAAT AGATAAGATT 000560
000561 AGAAGCATGA ACTGAGGTGG AAGGAAGCCA CTAATGGCAG ATAAGCCAAG AGGAACTAGA TGTGACAGCT GACATCCAGA 000640
000641 GAAGAGACAG AAACTGATTT GGTCTCAGAC TCAGAAGCCA AAGCAATCTG AGACCCGTTT CCACAAAGGG CAAATAGTTT 000720
000721 TCCACACGTG AACTGCCTTT GAGAGTATAA CATACTAGAA TACGGCGTAA CAACTGGCAT TAACGGTAAT TCGGTTTAAT 000800
000801 TTAACAAACA GCTACCATTC TTGTATGTAT ACTTTATGCT ATTAAACATA AACATGAATA AATGTGTGCT TATTATCTTC 000880
000881 AAAATAACTT TAAAAATTAA ATGGTATTTT AGAGGCTTTG TTTAATGAAA CACTATATAG TTCAGATAGA TTTTGGTTAT 000960
000961 TTTTATCTTT ATTTTTATCT TTTTGAGAAA GTCTCGTTGT GTCACCCTGG CTAAAGTGCA GTAGCATCAT CTCTGCTCAC 001040
001041 TGCAACCTTT GCCTCCCAGA TTCAAGTGAT TCTCCTGCCT CAGCCTCCTG AGTAGCTGGG GCTACAGACC CGCACCACCA 001120
001121 AATTGGCCTG TTTAATTTTT GTATTTTCAG TAGAGATGGG GTTTCACCAT GTTGGCCAGC CTGGTCTTGA ACTTCTGACC 001200
001201 TCAAGTGATC CACTCACCTG AGCCTCCCAA TGTGCTGGGA TTACAGGCGT GAGCCACCAC ACCTGGCCAG ATTTTGGTTA 001280
001281 TGTTTTAATT AATAAGCTTC CATACTTAAG GGGATAAGCT TCAATAGTTG GAAAAATCAG TGCATATAAA AAATCTACTT 001360
001361 TAGAATAGAT TTAAAAATTA AGCATATAGT CCCATAAGAA CAATGAAATA TCTGTGTTAC TGCACTGATG GTATTTTGTG 001440
001441 CCCATTTATA GAAACTTACT GGAATGCCCA GCCATGTAAC TCTTTAATAC CATTTAATAC AAGAACCTAT CCTAATGACT 001520
001521 GCTTCATTAA GGGACAGAAA CTCTCCCTGA TGAGCTTACA ATTTATTCAT GTCCCAACTA CTTACCAACT CTCTTAGGCA 001600
001601 AAGAGTAAGG TACTTTCTTA TCTAGAAAAA TATCCAACAT AAACAGCAAT GTAAAGAAAC ACTGTTAATT TCTCAATGGT 001680
001681 AACTGAAAAA AAAAAAAAGT GTGGCTAGAT AACTGATTTG AAAGAGAAAA ACATGCCCAC ACTGAGAATG ACAATTCACA 001760
001761 CAGGTCTGAG GGCCACGTCC AGCTCACCAT CTTCATACAT CACCAACAGC ACACACTCAC AGGCAGCCGC ATGCACACCT 001840
001841 GACCGTTAAG AAGTTTGCAA AGGATGCGTG GTTTACCTTC CCACAGTGGA AGACTCTGCG GAGCAACTGA AGGCCAGATG 001920
001921 ACAAGGTTGT TGGCTTCAAA GAGGGGATTG GTGAATTTAC TCAGCTCACT GGGCTGATTA ACCCAGGACC ACAAAGACAT 002000
002001 CGTCTTCTGC TGTAGCTTCA ACTTACATCT GATCAAGAAA GAACACTGCC ATTAAAGTAA TTAATTTATA ACAACCATTA 002080
002081 TTGAGTGCTC CTCTTACGAG GACAATTTCT TCTCAGTATG AAAGAAGATA GAATACAAGA CTTTTGGTAG AGAAACAAAG 002160
002161 TGTTGAAAAA TCAATAGATT TGTCAAAAAG CTCAATCGGC ATTAGAACTC TCAACAACAA CAAAACAAAG AGTATTTTAC 002240
002241 AGGCTTCCAA GAAGCTGGCA GGAGGATAAA AACAGAATCT GGTCACATCA GGTTTGGTGT TAAACCTTAA CCCAGAGAAC 002320
002321 ATTACTGTAC ACAAAAGTCC TTTGTTATAT TTGGGATTCT ATTTTAATTA AAAATAGCTA AGCATAAAAA AACTTTCTAA 002400
002401 CCTTTTTGTT TCTGAGAAGC CTATAATATA AACATAAAAA TTATACACTT TTTGACATTT ATGTCCTATT TATTTTTCTA 002480
002481 GTTTCTTTAA GAAAGGGCTT GTTGTGCAGA AACAACCAGG ATAGCTTACA AATATGAATG TCTGGAAAGA CCCCCAGGGT 002560
002561 CTTCATTATT TACATTGTTT GATAACCACT TTCTAATTGT TTTTTTTTTT AATTTTTTAT TTTAATTTTT CCATAAGTTA 002640
002641 TTGGGGAACA GGTGGTATTT GGTTACATGA GTAAGTTCTG TAGTGGCGAT TTGTGAGATT CTGGTGCACC CATCATCCGA 002720
002721 GCAGTATACA ATGAACCCTA ATTGTAGTCT TTTATCCCTC GTCCCCCTTC TGTCCCTCCC CCAAGTCCCC AAAGTCCACT 002800
002801 GTATCCTTCT TACGCCCATA CTAATATTAA AAGTGGAGGT TGAGTCAAAT CTCAAACAAA ACTTAAAATT TTTTAGAGAC 002880
002881 TTAGCTTTTA GGGAAAATAA CTTACATGTA CATAAAATAC AGATTGTCAA AGATGAAAAA TCAATGTGAA TCTTGACATA 002960
002961 AATACATATT TAATCTATAT CCACATACAA TGAACAGGCT TCATAATAAT TCTAAAACTC TGGAACACTC TTTATCATGT 003040
003041 GAATAAACTG TTAGAGAAGG ATAACAGTCG ATCGGCATGT TTTAGAAAAA AATACATTTT AACACAGATT GAAAGACAGT 003120
003121 CTGTGGTAAA CCTTACATCA ACCAAAAAGA TAATACATTC AATTCTCATA AGACTCAGTT TAAGCTGAGA TTTTATTATA 003200
003201 AAATCAGTTT TGTCTCTGAA ACCACATGAT TATTTATGAG CTACGTGCAA CTTACTGCAT TCTTTTTGAG CTAGCAATAA 003280
003281 AAATAATCCA CATAATCATA GAGCCTATGT GGCATTGGAC TTTAACTGCT GGGATAGCAT GTCCCACGCT ATGTTCCCAG 003360
003361 GAACCAGGGA TGACAAGGAC AGGACATTAT TGCATCCACT GCCTCCAGCC CTGTGCCCCC TGCCCATGGC CGGCCAACCA 003440
003441 CTGAACTTGC TCTGGCTGAG CCTGACACCA CTTCAGAATC CTTCCCATCA GCATTGCTGG CAGCCTCTAC CAACTGGGAA 003520
003521 ACAGAATGGG AATCTATTTT GATCCCTTCT TGAAAGCTAG TCCTGAGGAT ATTAACAGGT ATAACACCAA AAAAAATTCA 003600
003601 TCATCAAACA CATTTCTTAA ATGCTGAATT AAACTTATAT ACATTGCTTT ACTGAAGAGT GTCTTAAAGC CTTTAATGAT 003680
003681 TATGCGTTAA TCATTAAATC CTCCCTTCTA AGTGGGGGAG TTAATCCTCC CCTCTAAGTG GGGAGGATAT TATGTCATAT 003760
003761 TCACCAAACT TCCTTGGCTA TAGAAATTGC CAATCCCTCC TGTCCCTCCC TGCCAGAGTA CAGTCCAGGG CTAAGCAACA 003840
003841 CATGCTTCAG AAAATGGTGG CTGCCAGCAA TGAGGCAAGG AAGGCTGCTG ATTGTACCCT GAAGAGATTA CCAGGCAACC 003920
003921 TCCCTGAAAG ATCATTCTGA TGTGAATCTT GTAAATGAAC CTATACACTT GATGGTGCCT GGGCTGTAAG GTGAGCTTGC 004000
004001 CACTCTGGGC CTGAGGACAG TTTCTAGGTG TAACAAAGTC TGGAGCAGGA GGAGGAAGAC CTGTAATTTA GGCCAGGGAT 004080
004081 CCCCAAACCC CAGGCCATGG ACCAGTAAGG GTCCGTGGCC TGTTAGGAAC TGGCCACACA GCAGGAGGTG AGTGGCAGAT 004160
004161 GAGCGCGTAT TTCCACCTCC TGTCAGATCA GCATCAGATT CTCAGAGAAG CGCAAACCCT ACTGTGAGCT GCGCATGTGG 004240
004241 GGAATCTAGG GTGCGCCTTT ATGAGAATTC TCCTTATGAG AATCTAATGC CTGATGATCT GACATGGAAC AGTTTCACCC 004320
004321 CAAAACCATC ACCAATCCCG CTGCCACCCA ATCCAAAGAA AAGTTGTTAT CCACAAAACT GGTCCCTGGT GCCAAAATGG 004400
004401 TTGGGGATCG CTGCTCTAGG CCACACTTTT GATGACCAAC TGACTCTATG TCCTGGGAAA AGTCACGTAA CTTCTCTGGA 004480
004481 TCTTACTTTC TTAATAAAAT TAGAGGGAAG ACCTGAATTA TAAATTAAGG CTTTTTCCAC ATGTAAGATA CTATGATCCT 004560
004561 ATGTTAAGAA ATTAACATTT AAAATGGTTG CCCCTTAATT CACGTATGGA CTAATTTTAA CCTAACAGAA CAAAGTCTAG 004640
004641 GACATGCTCT CATAAAAGAA TATACTTCAG GTCATTTAAA TTATAATTAA CTGTAGCCTC TACCTTTTTA TAAATAATTT 004720
004721 TAATATAGAT CCAAATCGTC GTCTCCTAGG AGATTCTGGC TACTTAGGAA GTAGCCAAAA CAACGGAAAA GGAAAGGTCC 004800
004801 CCATGTGAGC AGTGTACTCA CCTTTCACTT TCATTGTTGC CCAGAAATGT TCCAAACTGT GAGGCATAAG CATGCTCAAA 004880
004881 GAGCATGATG AGGAAATTCT CATTAAACTC AAAAGAACAG GGAAACTGAC GAAGGATCTG CCACACGCAG TCCAAGAAGA 004960
004961 GAAGAAATAC AGGAGCCTCC CACTTCTGCT TGGTGTTACA GTAGGCTGAC TGTGCACAGC GCTGCTGGAA TGGGTGACCA 005040
005041 GCCTAGGGGG AAGATGGAGG CGTGACAGTC ATATCCTGGT GAGATCACAT GACAGAGCAT TCTACCGACA CCACTATACA 005120
005121 CAATTACAGT GACACTCCTA GTACCTGGAA CATCATATAA TTAGGGTAGC TGTTGTACAG ATTAATGATT TCTTGGTATA 005200
005201 AAATAAATAG CGGCAGCAAC TAAGGAAAAA GACACACTTC CAAATCCTTA ATGAGGCTGC GCGGCTAAGG TGTGACCACA 005280
005281 GGAACTGCAC TGCCCTTGGA ATATCCCATG GAAGAATAAT GAACTTAAGC AATAATAAAC TTACAAAATA AACCTTTCTA 005360
005361 GGTCTACAAA ACCTGGAGCA AAGTCAAAGA ACATAAGCTC TCAGTACAAA GAAGAATCAT CACCTCTGTC TAACACTGTA 005440
005441 GATTGTGCTG TACACTAAAC AAGCCTCACC CTAAGTGGAG ACAGATATGG AACTCTGATC ACCTTTATAA TGTCAGCTCT 005520
005521 GATAGTAAAT CTCTAATTAT ATACGAAAAG TTATTGTGTT GAAAGATCTT TATGAGTACT TTTCTACAGG AGATAAAGCT 005600
005601 GTCATTAATT ACCCTCTTCT CCCAAAATGA ACAGCAAGAG TCTGCCATCT ACTGACCAAA GTAAATTTAA GACTCATTTG 005680
005681 ACTGTCTTGT TCAGAACCCA AATGCTGACC TTAATACAAA TCATACTCTG CTAGGAATTT CACAGATCTG CTTTGTCTCT 005760
005761 GGGTCCTTCT ACTACTGTAT GTGACAAAGG TAATGACATA GAAATTTTAC AGTGGTTCAC AGAATTGTGA TATCCATTAA 005840
005841 AATAACATAA
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Predicted Small Protein

Name ENST00000498997.2_smProtein_4286:4522
Length 79
Molecular weight 8711.0073
Aromaticity 0.0897435897436
Instability index 41.9858974359
Isoelectric point 6.69659423828
Runs 11
Runs residual 0.0073483427142
Runs probability 0.0437924555572
Amino acid sequence MPDDLTWNSFTPKPSPIPLPPNPKKSCYPQNWSLVPKWLGIAALGHTFDDQLTLCPGKSH
VTSLDLTFLIKLEGRPEL
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLHHHHHHHLLLLLLLLEEELLLLLE
EEELLLEEEEEELLLLLL
PRMN -
PiMo -