ENST00000502437.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000502437.1 |
Source |
Gencode19 |
Same with |
lnc-PCSK1-1:1 |
Classification |
intergenic |
Length |
652 nt |
Genomic location |
chr5-:95549050..95550779 |
Exon number |
2 |
Exons |
95549050..95549493,95550572..95550779 |
Genome context |
|
Sequence |
000001 GTGGTTTCTT CTTCTCTGCA ATCCCTCTTG CACTGGCCAA TCGGATCATT CTCCAACACA GTTCTTACAG TGGCTACTAC 000080
000081 ATCAGGTGCA CTCTCTTCTT CCTGGCAGGA ATATTTTAGA AGGCTTTACC AAGAATGTGG AATTACACTA TGGCTTTAAG 000160 000161 AATTTGGCCA GAAAGAGGTC AGAGGAGGAC AGAGCAAACT TCAGAAATAG ACAAGGTCTT ACTCTGCTAC CCAAGCTGGA 000240 000241 GTGCAATGGT ATGATCATAG CTTACTACAG CATTGAACTT CTGGATTCAA GAGATTCCCC CACGTTGGCC ACCCAAGTAG 000320 000321 CTGGAACTAC AGGCATGTAC CATCACACCC AGCTTATATA TGTATATAAT TATTTTTGGA CATACAGGAT CTCACTACAT 000400 000401 TGCCCAAGCT GCTCTCAAAC TCCTGGCCTC AAGATGATCC TTCTGCTTCT GCCTCTCAAA GTGCTGGGAT TATAGGCATA 000480 000481 AACCACCATG CTCAGTCCAA TGTTTTTAAT ATCAGATACT CTTTAGTATC TTTAAGATTT TATACACTGT GTATGCATTA 000560 000561 GTTAATTATT AAATTTTAAA GAAGTAAATT ATATGGATAA AAGTATATCC ACATATACCA ATTAAGAGAC AAAGATTAGC 000640 000641 AGAACATATT AA |
Predicted Small Protein
Name | ENST00000502437.1_smProtein_134:253 |
Length | 40 |
Molecular weight | 4747.4589 |
Aromaticity | 0.128205128205 |
Instability index | 59.3025641026 |
Isoelectric point | 7.93499755859 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.049496555379 |
Amino acid sequence | MWNYTMALRIWPERGQRRTEQTSEIDKVLLCYPSWSAMV |
Secondary structure | LLLHHHHHHLLLLLLLLLLLLLLLLLEEEEELLLLLLLL |
PRMN | - |
PiMo | - |