ENST00000502479.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000502479.1

Source

Gencode19

Same with

lnc-DHX37-3:6,NONHSAT031731

Classification

intergenic

Length

4972 nt

Genomic location

chr12-:126443248..126464994

Exon number

6

Exons

126443248..126443498,126446288..126446527,126447557..126451454,126451740..126451888,126454357..126454542,126464747..126464994

Genome context

Sequence
000001 CCAACATTAT TTTTGTGCAG ATTTCAATTC ATGCTGCACT CATCCTGGGG GCAAAAGTTA AAGGTTTTCT AAAAAGCTAC 000080
000081 TTAGTGAATG TCTTAGTTAA TGGAAAAGAA AATAAGTCAA TCCTTTTTTT TCTAACCTTG AAGTTGCAAA GATTGACAAT 000160
000161 GAACTCTGTA ATGGTGCATT CTCCTCTTGT GTGGTTTTTG AAAGCTGAGT TATCCTTCCT GTAATGATTC TGCACCTGCA 000240
000241 AACTATACGT GGCTTCCTCC AGGCAGTAAA TCTACAGCCC AGGCTCCCTG CATCTTATGG CTCCAATCAC TTTGGATCTC 000320
000321 ATCGTCGCCT GCACATTGCC ATACACAGGG AAGGAGAAGA GATGGAGAAG GCAAAGACTT TCTGAAAGCC GTGGCTAAAA 000400
000401 GCTGGCATGT GTCACATCAG CTCACATTCC ATTGTAGAGA CGGGGTTTCA CCGTGTTAGC CAGGATGGTC TTGATATCCT 000480
000481 GACCTCGTGA TCCGCCCGCC TTGGCTTCCC AAAGTGCTGG GATTACAGGC GTGAGCCACC GCTCCCGGCC TGGCAGGCAT 000560
000561 TCTTGAGGCA AACGGGAAAT GGGTGAACGG GAGGAACATT GGCAGCACTT GTGGTCTGCA CCAAGAACTG AATCGAATTT 000640
000641 CCATGTGTTA TTGAATGTTC ACAAAGACCT TGTACAGCGA GTGTTACTAC CTCTGGTCAA TGATTCAACT CAAGGCTCAG 000720
000721 AAAAGTCAAG TGTCTTGTCC AGGGACACTT AGTCAGAAGT GAATCCAAGG TTTAAGCTCA AGTCTGCCTA ACTCTGAATT 000800
000801 TCACAGCCTT TTGCTACATA TGGCGAATAA TATATCCCTG AGCACTAAAG GCAGACTCCA AGGATCTTGT CTCTGCAATC 000880
000881 ATCATTCTGG CCATAATTTA TGAAAAGCAA CCCAAAGTAT GTGATGTAAT AAAAAGTACT ATCTATGAGT TTACCCTTCC 000960
000961 AAAAATTGAA CTGAATTCTG AGCTCTAAAT TTGGAATCAA AAGAACTTTT CTCTGCACTA ATCATTTGGA ACATCACTTA 001040
001041 AAGAAAACAA CGAAAAACTG GTGTCCCCTG AGAGAAAGCA ATACAAAACA TTATGCATAA AGAAATCCTT CCAAAAAATA 001120
001121 AACCAAATCC AGTCAAATCT CTAGTTTTGA CTCCTAGCTT ACCGGAAATA CGTGATGGGA AAAAAATGAA ATGACACCAC 001200
001201 TATGATTCAA TCAGCCAAAT CCAGCATATG CAAATTTCTA CCAGATAAAT GGTTTAGTTT CTTCCCCAAA CAAATGGCAC 001280
001281 AAGGAAACGG AGGTAAGAAT GGGATGCTGT TATAGATTTT AAAAGATTTA AGAAAGTATA AACTAAATAC ACTATGTGCA 001360
001361 TCCTCTCTGA ACGTGCTTCA AACATATCAA GGGGTCAATG AGCAGTTTTG AAACAATAAG GGAATTTGAA CACTGAATGG 001440
001441 TTGTCAGAAG ATAGTAAGAG ATCATTATTA ATTTTACTAG ACATAATGAT GTTCTGATTT TGTTTTTTTT TTAAAAAAAA 001520
001521 AACAGTGTTA TTTCCTTTAT AGATACATCA TATAGTATTA ACTAATGAAA TGCTTTGATA TCTGGAACGT TTAAAAAATA 001600
001601 TTCCCGATGG AGTAAGTGCA AAGAAACAGG TAAGCAAAAT GCTGATAATT GCTGAAACAC AGGATGTGTA CCTGGGGCTT 001680
001681 CATTTACTAT CTCTTCATTT TCTATTTTGA TATTTGTTGG ACATTCTCAT AAAAAGGAAA GTTATGTTTT ATTTTCTCAT 001760
001761 AAGCTAGTAA TGAAATAGCC CTACGTAACT GATATTGTAG AGACAAGAAT AGGTGTAATA GAGCTTAAGG TTTTCATTTA 001840
001841 AAAAACTATC TGTAGACTTC AATGGATCTT AGGTGGCATC CATGCAATAA CACTCGTGGA ACATGCAGGA CAGGTGTGGA 001920
001921 GCTCCATCTT CACACAGTGA CATTTTTTAT GCTTCTGTTT TCCCTAAGAG TGGAGTGAGA GGATGATTAT TTTATATCAT 002000
002001 GGACTTCTTC CCTGCTATAC TTTTTTTAAT TATTTTACTT TCACTTCTGG GATACATGTG CTGAGCATGC AGGCTTGTTT 002080
002081 ACATAGGTAT ACATCTGCCA TGGTGGTTTG CTGCACCTAT CAACCCATCA TACAGGTTTT AAGCCCTGCA TGCATTAGGT 002160
002161 ATTCGCCCTA ATGCTCTCCC TCGCCTTTCC CCCCACCCCC TGATAGCCCC CAGTGAGTCA TATTCCCCTC CCTGTGTCCA 002240
002241 TGTGTTCTCA TTGTTCAACT CCCATTTATG AGTGAGAATA TGTGGTGTTT AGTTTTCTGT TCCTGTGTTA GTTTGCTGAG 002320
002321 AATGATGTTT TCCAGCTTCA TCCATGTCCC TGAAAAGGAC ATGAGCTCAT TCTTTTTTAT GGCTGCATAG TATTCCACGG 002400
002401 TGTTATATGT GCCACATTTT CTTAATCCAG TCTGTCATTG ATGGACATTT GGGTTGTTTC CAAGTCTTTG CTATTGTAAA 002480
002481 TAGTGCTGCA ATAAACATAT GTGTGCATGT GTCTTTGTAG TAGAATGATT TATAATCCTT TGGGTATATG CCCAGTAATG 002560
002561 GGACTGATGG GTCAAATGGT ATTTCTGGTT CTAGATCCTT GAGGAATTGC CACACTGTCT TCCACAATGG TTGAACTAAT 002640
002641 TTATACTCCC ACCAACAGGG TAAAAGCATT CCTATTTCTC CACATCCTCT CCAGCATCTG TTGTTTCCAA ATGTTTTAAT 002720
002721 GATTGCCATT CCACCTGGCG TGAGATGGTA TCTCATTGTG GTTTTGATTT TCATTTCTCT AATGACCAGT GATGATAAGC 002800
002801 TTTTTTTCAT ATGTTTGTTG GCCACATAAA TGTCTTCTTT TGACTTTTAT GTGGAAACAA ATTTAACTGC ACAGAGAGGT 002880
002881 GAAAATTAAT TAATAACTTT TAAAGTAATT CCCTAAGTTT CTAAGGATCT ATATGTTTCC ATCTGACTTT ATTTTATTTA 002960
002961 AGCTCTTGAT TGATGCTGCA TTTGGAGCAG GTTCATGAAC ATGAATAGAG TTAATCTGGG ACAGATTTCC CTCATTTGAT 003040
003041 TTTTTCACTG TTTCCATCAC AGAACTTATT TCATGCTCAC CATGTTTGCA GGCATTGAGC TTGGTACTGG AGCCACAGAG 003120
003121 CTGGATCAGA CAGACTTGTG CAAATATTTC AGGTTTTTTT TGTGGGGGGG TCATATTTAT AGATAAATAA CAGTAAAGAG 003200
003201 TGACGGGTTC TTATGAAAAT GCATACACAG TGAAGTAGAG GGTGAAAAGG AGGGATGTGT TCTATGAGGA GGAAGAGTGA 003280
003281 TAAGAAAGTG TAAGGGGATG TGTCTGTGTC TAGACATATG TGTGTTCACG TGTGTGCGTG CTTGTGTGTA CTGCATGTGT 003360
003361 ATATGTGTGG CCATGCACCT GTGTGCATGT TCATGTGTGT GTGTGTATGT GTCTGTGTTG AGGACTAAAT TAATTGGGCT 003440
003441 TATGGAAGCA GGGAGCCACT GATAGGTTTA ATTAGAGACT GACATGATAT GATAGTTTAG GTGGATTTCT CTGGGGGCTG 003520
003521 TGTTGAGGGA CAGTGGGGAG GAGAGCTAGA AGGAAGAAAA GGACACATGC ATAACAGAAG CAATATCTGT CTATGGGATG 003600
003601 GTGGAAAGAA TCAGAAAAGA CTTAATAAAA CATGTGACAC TTTAACTGAA TCTTGAAATA GACAAGTGTT GGAGGAGGGA 003680
003681 GTTGGACCAG ATACTTCATG CAAAGGGAAG AAAAGTGCAC AAACAAAATA TGAGAAACAA GGCAGACAGG CATTTTTTTA 003760
003761 AAATTTTCGC ACCCACTGAT AGACCAGTGA TGCATTCACA TCGTCTGCAT TCATGATCAA CAAAAGTGCT TTCCTAGAAC 003840
003841 ATGAACCTCA ACCCAAGTGT CGCCTCAAGT AGTGTATGCA TGAACTCAAG CATTAAATTA GAATTGATTT TTTAAAAAAC 003920
003921 TCACACAAAC AGATGTATTA TTTAAAAATC TTTAAAGCAG GTTTAAACAG TTTTCAGGAT TAAAAGCAGC CACTATTAGA 004000
004001 AAGAACAAAA ATACATTTGA CATAAATATA AGGAGCCTCA ATAGAACCTC CTGTACCCAG TCATTGTCAA TGCCACATCC 004080
004081 ATTCATTCAC CAGCCCTTAT ATCAATGCTT GCTGGGCTCA CTTACCACGA TCAGCACGTG CATGTCCTTA TCTGAAAGCT 004160
004161 TGCCACTCAA ATGTGCTCAG TCTTACCTGT GTGGCTGGGA GTGTTGGGGA TTTAATGTCA AGGGAAAGAA TCTTCCATCA 004240
004241 ATGAATGATG AAAGTTAGTT TTCACAACTT CCGGTCCCCT TGGCCCTCAT CAAAGGGCTC CAGGTGAGGT TTGGGCTCCT 004320
004321 TGCTATCCTC CGAGTTTCCA CGGTAGTTTT AAGCACCATT GCCCGTGGTA ATGGCTGACA TTGATACTGC ACTTTTTTTT 004400
004401 TATTTAAGAT GGAGTTCCCC TCTGCCACCC AGACTGGAGT ACAGTGGCGC GATCCTGGCC ATCGCAACCT CCGCCTCCCA 004480
004481 GATCCCTCCT ACAACACATG AGAATTGTGG GTGCTACAAT TCAAGATGAG ATTTGAGTGG GGACAAAGTC AAACCATATC 004560
004561 ATTAGATAGG ACACTGGAGA AAGGCAAGAA AGAAAAGACA TCTGAAGAAT GAAGGGAGCC AAAGAAATGC CAACATTTTG 004640
004641 CTTTTTGAAG AAAAGCTAAA TTAAAGTCAA AATGGATTTA TCAATTTCCT TGGGTTCGTG AATGTACAGA ACTTTATTAA 004720
004721 GACTGTCATG CTGTCATCAT GGCTGGATCT GATACGGCCA CCGTGGACCT TGAGGTGACC TCGGGAATGG AGACAGTGCA 004800
004801 TGGGAGAGAA TCACATTGGA AGGGGCCTGG GTTTCTGAAG ACCCTGTAAG ACAGATCTCC TTGCAGCCCT GACTGCCCAC 004880
004881 ATTAGGGCTT TTATGTTAGG GTGAAGTTAC CTTGCATTGT CATATAAGCA ATTGCTATTT GTGGTGTCTT GCAAATAAAC 004960
004961 CTATTCTGAT CT
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Predicted Small Protein

Name ENST00000502479.1_smProtein_1982:2170
Length 63
Molecular weight 7128.45
Aromaticity 0.161290322581
Instability index 55.0774193548
Isoelectric point 8.35418701172
Runs 13
Runs residual 0.0560368663594
Runs probability 0.0466824290354
Amino acid sequence MIILYHGLLPCYTFFNYFTFTSGIHVLSMQACLHRYTSAMVVCCTYQPIIQVLSPACIRY
SP
Secondary structure LEEEELLLLLLLEEEEEEEELLHHHHHHHHHHHHHHLLEEEEEEELLEEEEELLLLEEEE
LL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLLLL
LL
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