ENST00000502661.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000502661.1 |
Source |
Gencode19 |
Same with |
lnc-GPM6A-3:1,NONHSAT099339 |
Classification |
intergenic |
Length |
905 nt |
Genomic location |
chr4-:176267509..176324261 |
Exon number |
3 |
Exons |
176267509..176268151,176277371..176277492,176324122..176324261 |
Genome context |
|
Sequence |
000001 CAGAATCTCT CTCTGCTGCC CAGGCTGGAG TGCAGTGGGA TGATCTCGGC TCATTGAAAC CTCCACCTCC AGGTTCAAGC 000080
000081 GATACTCCTG CCTCAGGCTC CCGAGTAGCT GGGACTACAA GTGTGCACCA CGATGCCCAG ATGGAGTCTT GCTCTGTCGC 000160 000161 CCAGGCTGGA AAGCAATGGC GCTATCTTGG CTCACTGCAA CCTCCGTCTC CTGGGTTCAA TTGATTCCTC TGCCTCAGCC 000240 000241 TCCCAAATAG CTGGAATTAC AGGACACTCA GAAAAAAAAT GAAATTATGA GAATTGTTTT CTCAAATCCT TTTCTACTGC 000320 000321 AACCTTCCCA CCATTACGAG CATAATGAAA CTCAAATGTG AGTCCAAGGA ATTATTATCT TCATTTTTCT ACTGAGGAGA 000400 000401 ACTATCAAGA CTTCTAATCA CATGGAATAA CTCATTCAGG AAATGAGGCT GGGTTGCTGA TGATGGAATG AGGGAGTTGG 000480 000481 AGGGATTAGA AATGACGTAT CCAGAATAGA CAATGGAATC GGTGACAGAC TTCCACTAGT GGCAGCAACC TGTGCCTCAC 000560 000561 TCCTGCACAA ATCCAAAAGG GTTTTTGAGG CATTTGATGG CATGTGCCTG TGAAACAAGT AGATATTCTG TCTTGGGAGC 000640 000641 TTGAGAAAAG GCCAGTAGCA CTGTTCTAGT AGCCTAAAGG CAAACACACA TTTAAATAGT GGTGGGGTTA GTAGGCATGG 000720 000721 GATGATGAGT AATGAGCAGC TCAGAAATGG TCACTTTAAA GATCAAAGGT CATATGCCCA CATTTTCTGA AATCATGCCA 000800 000801 TTTGGAATCA TCTTACATCC CTAAGAATAA AAATGTTCCT ACCAAAATCA TTTAGAAGAA GTTTTCTCTG ACAACTCACC 000880 000881 CTGTTAAAGG TCAACATGAG ATTTT |
Predicted Small Protein
Name | ENST00000502661.1_smProtein_731:823 |
Length | 31 |
Molecular weight | 3360.0399 |
Aromaticity | 0.0666666666667 |
Instability index | 84.72 |
Isoelectric point | 6.69757080078 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.0345786963435 |
Amino acid sequence | MSSSEMVTLKIKGHMPTFSEIMPFGIILHP |
Secondary structure | LLLHHHEEEEELLLLLLLLLLLLLEEEELL |
PRMN | - |
PiMo | - |