ENST00000514377.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000514377.1 |
Source |
Gencode19 |
Same with |
lnc-LIFR-3:2,NONHSAT101089 |
Classification |
intronic(AS) |
Length |
539 nt |
Genomic location |
chr5-:38401171..38403464 |
Exon number |
3 |
Exons |
38401171..38401323,38401926..38402183,38403337..38403464 |
Genome context |
|
Sequence |
000001 TCATATGCTG AGGTTGCTAA GATCTATGGC AAGAATGAAT CTTCTATCTG TGAAACTGTG AAGAAGGAAA ATGAAATTTA 000080
000081 TGCTAGTTCT GCTGCATATA TAGGGTTCAG TATTATCTGC AGTTTCAGCC TACCTATTCT CCCAGAGGGC ATGCATTCTA 000160 000161 TGGAGACAGA GCTGAATGTG TGCCATCAGA AGACCAAAAT CAAGCGACAT TTTAAAAAGA AAACAGACTC TTCTGGGAAA 000240 000241 AATGGTGACT CCACAAAGTA AGAAGCCACC AAGACTTGTA GGACATTCCT TCATCTTCTC CTGGATGGGG CAACCCAGCC 000320 000321 ATGGATATAT GCCTCCAATC AGCATAAATG CCCATTGCTT GATAAAGTCA ACACACGTGT AAGATGGAAA TTCTGTTTCT 000400 000401 TGAAGGGAAC TCCTCAGAGA AAAGGACCAC AAGCAAATTG CTGCTGCTAC AAAATGATAC CATAATGAGA ATGGAAATAA 000480 000481 TCCTGGATTC TCTGCTCATT TCGACAAGTA AAATAAGGCA CATATTTTTC AATGGATAA |
Predicted Small Protein
Name | ENST00000514377.1_smProtein_383:538 |
Length | 52 |
Molecular weight | 5911.9094 |
Aromaticity | 0.0588235294118 |
Instability index | 49.0490196078 |
Isoelectric point | 6.53692626953 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0497752654615 |
Amino acid sequence | MEILFLEGNSSEKRTTSKLLLLQNDTIMRMEIILDSLLISTSKIRHIFFNG |
Secondary structure | LEEEEELLLLLLLLLHHHHHHHHLLHHHHHHHHHHHHHHLLLLLLEEEELL |
PRMN | - |
PiMo | - |