ENST00000517964.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000517964.1

Source

Gencode19

Same with

lnc-CDCA2-1:1,NONHSAT125633

Classification

intergenic

Length

1131 nt

Genomic location

chr8+:25543314..25545040

Exon number

2

Exons

25543314..25543428,25544025..25545040

Genome context

Sequence
000001 CGTGTGTGCA CGTCTGTGTG TGTGCTTCAG TCACAGAAGG GGGTGAGAAG TGGGAAGAGG GGATTTGCAT AGAACCTCCA 000080
000081 ATTTTCCTTA TTTCCTAGGG AGTTGATGAT TTCAGCCAAA TATAAGTCTT AACGTTACAT CTGCAATGGA AAAACAAGTC 000160
000161 AAACTCAGCA AAAAGGAGCC CTGAAGAGAC AGAGTTAAGT GCTTCCGTGA TGAGAGTAGA GTTGGCCTAT GCTGTCCCTC 000240
000241 CCAGGACTCC TTTACCCAAG AGAAAGAGAG AGTGTGCATC CAAAGGGGAG TGAAAATAGA ATATAAATAG GGAAAATAGA 000320
000321 ACCATTCAGA GCAGTTCAGG GATCTTTACT ACTCTGACAT GGAAGGAAGA AGGAGGAGAA GAGAAAAGAT GAACGGACCT 000400
000401 TGAACCTGGG ATATCGCTCA TGTGACTGCT ACATTGGTAT TAAGATACAG CATTCATGTG CCCTGGAATG TTTTGTTCTA 000480
000481 TTAGGTGCTA CACCCAGTAG AACAGTGCTC CATCCAATGC AATTTTCTGG AATTTAAACA ATCCAGACCA GAATTTTTCC 000560
000561 TCCTTGGAGA TGGAATGTCT TGCTCCAGAG GGAGGAGGAA GAAGAGAAAA GAGAAGTCTC AACCAGCCTC CTCTCTACCC 000640
000641 CACACAGAGA ATAGAGATGC AAAACTTCTC CCATAGAGTG TTTCAGCTTC TTCCTCGTTC CTCTTGCTTC TTTTCTCTTG 000720
000721 GGATAATGAC TTGGGTTTGG CCAGTATGTA AAGTTGACTT GTGGTACCTC TGGCTCTTCT CCAGGGGTGC TCACAGAAAT 000800
000801 AACTACAGTG GACTAGAATG AGATGCTTGA AACCTTCCCC CGAGCCTAGC TCTGCATTTA GGAGAACAGC ACAGCGCACC 000880
000881 ATGATCTGAT ATAGGTATAG GTGGGTGGGA GTCTCAGTCT GTAGTTCTAT ATCACCTATT AAGAGACTGG AACCTGGTCC 000960
000961 CATGTTTTCT GCAGGAGGTT GAGCTCTTAA CAATGTGCCA AGCCAGCAGC TGTGCCCTAG AGTCTTGGCC TAAGACAAGC 001040
001041 AAATAATTGT CAGATGACTG AATAGTTCTG TTTCCTTATT AAATCTTAGG TTTAGAATTC CTTTCACAAT TAAAAAGATT 001120
001121 TGGACAACAA C
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Predicted Small Protein

Name ENST00000517964.1_smProtein_569:820
Length 84
Molecular weight 9834.2725
Aromaticity 0.144578313253
Instability index 64.0590361446
Isoelectric point 9.34979248047
Runs 15
Runs residual 0.0406961178046
Runs probability 0.036065477242
Amino acid sequence MECLAPEGGGRREKRSLNQPPLYPTQRIEMQNFSHRVFQLLPRSSCFFSLGIMTWVWPVC
KVDLWYLWLFSRGAHRNNYSGLE
Secondary structure LEELLLLLLLLLLLLLLLLLLLLLLLEEEELLLLHHHHEELLLLLEEEELLEEEEEEEEL
LEEHHHHHHHHHLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH
HHHHHLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTT
TTTTToooooooooooooooooo