ENST00000519805.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000519805.1 |
Source |
Gencode19 |
Same with |
lnc-RP11-127H5.1.1-1:1,NONHSAT128232 |
Classification |
intronic(S) |
Length |
716 nt |
Genomic location |
chr8+:106682219..106691259 |
Exon number |
3 |
Exons |
106682219..106682263,106688131..106688249,106690708..106691259 |
Genome context |
|
Sequence |
000001 TCAGTGGTGA CATTAGCGAA GAATGACAGC ATGTCTCTAA CAAAGATGTG AAAACTGAGG CTTTTCAAAG TCACACAGTT 000080
000081 AGCAAAATGT GGAGCCGGAA TTCAAATACA GGTTTCCGTG GCTTGAGATC CCAGCTTTTC ACCATTAAAC AGTGTCACCT 000160 000161 TCAGAAATGG CCTTTATGCC TCCTGGTCTC AACATAGAGC AGAAAGGACC ATCTGGACAC CACATATGAG GAAATCAGAC 000240 000241 ATCTCTAGGT TGAATCATGC CCAAAAGGAC AATTTCTTGT CAGATAAGCT GCTGTGTACT AAGTCTGATA ACTAACAAAA 000320 000321 TTGCTATATG GTAATTTTAA CTGGAAATTG TCCACTTTTA TCCTCCGGTT TTCTCTCTTA TTCCATTGGT AACCACCCTG 000400 000401 GGAGTTCTAA TACCATGTCC ATGTACAAGT GCTTAAATCA ACCCTCAGGT TGTGACAGTC AAGCTACAGT GGCTGTGAAA 000480 000481 TAATCTGCAC AGCAGAGTAT GCTATGTCAT TGGCTCAATC AGCATAATGC AGCATAATAG AATAGAAGCA CACAATTATA 000560 000561 TAATGCCATA ATTTGATTTC TCTCTAATTT CTGGACACAT CACAAAATAA TCAAGGCAGT GAAATGAAGT GTAAAGAATA 000640 000641 ATGGCTGAGT TTGGAGTCAC ATCACTGCCA CTTGCTAGCC TGTGTGACCT TAAACAAATA AAAAACTCTT TCTTGA |
Predicted Small Protein
Name | ENST00000519805.1_smProtein_86:196 |
Length | 37 |
Molecular weight | 4250.9712 |
Aromaticity | 0.111111111111 |
Instability index | 59.9055555556 |
Isoelectric point | 10.9282836914 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.0455043278574 |
Amino acid sequence | MWSRNSNTGFRGLRSQLFTIKQCHLQKWPLCLLVST |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHLLLLEEEEELL |
PRMN | - |
PiMo | - |