ENST00000532413.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000532413.1 |
Source |
Gencode19 |
Same with |
lnc-LRRC32-2:1,NONHSAT023176 |
Classification |
intergenic |
Length |
559 nt |
Genomic location |
chr11-:76339140..76341407 |
Exon number |
2 |
Exons |
76339140..76339525,76341235..76341407 |
Genome context |
|
Sequence |
000001 GTGTCAGGGG CAGCTGCTGG AAGGAGGCGC AAGCACCACG GAGAGTCTGG GATGCCCAGC CAAGGAGCCC TGGAAGGGTT 000080
000081 GCCCTGGGGA CTGACACTGT GGGCTCTGTG TTTTAGCCAA GTCACCCAGG CAGCTGAACA GAAGATGGAC TGGAGGGAGA 000160 000161 AGCCTGGATG TAGGATCGCT CAGCAACAAA GGAGCCAGAA AAGGCAAGGT GTACACACCG TGTGCAGCAT GGGCGAGCTG 000240 000241 CAGGCATGCA GGTAAGAGTG TGTGCATGCA GGTGTGTGCA CACGAGTTTG CATGTGCTGA TGCAGATGGC TATGATGCGT 000320 000321 GGTGGTGATA TATACATGTG GATGCTTATG GATCTGTGCC AACCATTATT AAGCACATAT GTATACCCGT GTGTGTATAT 000400 000401 GCATGCATGT GTTTGTGTGA GTTGCAATGT GTATACAACT TTACACAATA AGTGAATTGA GTACATGTAC CTGTTTATCC 000480 000481 ACGGAAGTGT ATGATGACTG GACATATGTA AATATGTGTA TTTGCATGTG TTTATACTTT GTGCATAGAT GCATGTTTG |
Predicted Small Protein
Name | ENST00000532413.1_smProtein_245:454 |
Length | 70 |
Molecular weight | 7998.7066 |
Aromaticity | 0.0869565217391 |
Instability index | 48.6289855072 |
Isoelectric point | 8.15789794922 |
Runs | 13 |
Runs residual | 0.0490744726647 |
Runs probability | 0.0350372997432 |
Amino acid sequence | MQVRVCACRCVHTSLHVLMQMAMMRGGDIYMWMLMDLCQPLLSTYVYPCVYMHACVCVSC NVYTTLHNK |
Secondary structure | LLEEEEEEEELLLHHHHHHHHHHHHLLLHHHHHHHHHHHHHHLEEEELEEEEEEEEEEEL EEEEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL LLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii iiiiiiiii |