ENST00000535639.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000535639.1

Source

Gencode19

Same with

lnc-VAMP1-1:3,NONHSAT026070

Classification

intergenic

Length

2364 nt

Genomic location

chr12-:6548167..6560683

Exon number

6

Exons

6548167..6548842,6552712..6552883,6556127..6556253,6557203..6557316,6557806..6557903,6559507..6560683

Genome context

Sequence
000001 ACAGGAAAGG GCCCTGACAA GAGGATGGGA CTGCAGTTGT GGCTGCCAGG TCTCACTCTC CCTTGGATGG TCGGCGGGGT 000080
000081 GGGGGTGGAG GCCAGGGCTG TAGTGCAGCT CCCGCAGGTG CTGGCTCAGG GGGAGCAGGC AGGCTCCGGT TTTCGGTAAT 000160
000161 CCTCCTGGAT GGGGATGGTG CTGCCCTCCT CCTCCCTGGG GCAGCTGTAA TGACAAGGCT CTGCAGGCTC CACAGGACTT 000240
000241 TCTCCTTTGT CTGCAGAAGG AGATCCGATG AGTCTTGGCC AGCAGTGGGG GCAGGGGGAG ACGGGAGAAG GAGATGGGTA 000320
000321 GAGGCGGGTG CGCTTGGGGG AGGGGTGTCA GGAGCACGCC AGCTAAGGGG AGAGAAGGGG TAGGACCAAG GCTGGTGAAG 000400
000401 TGGAGCTGGT GGGTTTCAGT GAGATTCCAG GCGTGGGCAG TGGGGTTGAG CCAGTGGGGT GTGGTGCAGG GGCAGGACCG 000480
000481 GAGGCCTGTG TTCTGTCTCT TACTTGATCT ATATTTCCTT CGTTGATGGA GGAACAGGGC CCCGGCCAGG GTGAAAACAA 000560
000561 GGAACATTCC AGAGAAGATC ACAAGGATGC GAATAAAATC GGAGCTGCAC AGGGATCTTT GGGCTGTAAT AGGAGGGGAC 000640
000641 ACACAGGGGT TAGGGGAGGG TCTAGCCCTT GGCTCCCTCA GCCCAGCCCT CCTGTCACCT TGCCTCTCCC CTTTCCCCCA 000720
000721 CCTTATTCTA TCCCACCCGC CACCGTTGGC CAACTCCTCT CCTAAACAGT GGACTCTGCT TTTTCCCCTC CTCTTATCCC 000800
000801 TAATCCTAGG AGCTTTCTGT CTGGCTTCCC TCCTGGCCCC TCGTGTATGC ATTCTCTCTA GCGGTGGGGA TTAAGGAGAA 000880
000881 AACTCACGTG GCCAGTGGGT AGAGAGAGTC CGGGCAGGCA GCTGCCTGAA GTCAGCCAGA GTCTGCATGT GCCCAGCTGT 000960
000961 CCTGGCCTCC AGCATCTCTG GAAAAACAGA GACAGAATGA GTAGCAGCAG GGGACCCCAT AGGGCACATC TGAAGGCCTG 001040
001041 AGAGGTGCTG GATGGGATGG GAAGGCAGAA ACAGGCTGAC CTTATCTAGG GGTAGGAGTG GGGAGTACTG GTTGGGGTAT 001120
001121 CACCGCTACC CCACGTGATG GCACAGAGAG TTGCCTGGAA CTTACCACTG ACATAAGGTT GGAGTGCAGT GGCACGATCT 001200
001201 CGGCTCAGTG CAACCTCCGC CTCCTGAGTT CAAGTGATTC TCCTGCCTCA GCCTCCCTAG TAGCTGGGAT TACAGGACAA 001280
001281 GGAGAGGGAC AAATTCCTTC TTGGCATCCT TATGGCCCTG TGACCTGCTA ATGAATGCTG ACTCTGAGTT GCTACTAGAA 001360
001361 TTTGGTTTCC TTGTGGCTTC CCAGGAATTG GTCTCACTCT GCTCACTCTG TCTCCCAAGC TGGAGTGCAG TGGTACAGTC 001440
001441 ACGGCTCACT GCAGCCTCCA CTTCCTGGAC TCAAGTGATC TTCTCACTTC AGCCTTCTGA GTAGCTGGGA CTACAGCCCC 001520
001521 CTCTGCAGCT CTTCATGGGG GTCCACTCAA GTCAGAAGCC ACATTTGGGT GTGATTCAGA GAGCTGTTTA TGCAAAACCA 001600
001601 GCTTTGTCAC CATCAGGCAA GGCACCTGAA TTCCCACCGC AGAGAGTGTT GTGGCCGTGA GGACTTTTCT GTCACCAGCC 001680
001681 ATTTCCAGGT AGACCCAGTG TAATCACAAG CATCCTTGTA AGTGGCAAAG AGGCAGAGGA GACAGCGCCA GAGAGGCAGC 001760
001761 TGCATGAGAA GGATCAAGAT GTTGCTGACT TTGAAGTTGG AAGAAGAAGG CCATGAGCCT CAGTATGTGG GCGGCTTCTA 001840
001841 GAAGCTGGAA GGGGCAAGGA GATGGATTTG ACCCTTCAGC CTCCAGGGGC AGCTGTACCT GCCATCACTG ATTGTAGCCT 001920
001921 GGTGAGGCCT GTTTTAGACT TCTGACCTGT AGAGCTGTAA CATAATACAT TTGGGTTGTT TTCAACCACT AAGTTTGTGG 002000
002001 TAATTTGTTG TAGCAGCTGT AGAAAATGAA TACATATGAA TCCTCTGGCA TTTGTTTGAG ATTTGCTCTA TGGCCTAGTA 002080
002081 TGTGGTTGTA AATGTTCCAT CTGTGCCTGA AAAAATGTAT ATTTCTAATT CAGTAGTCTC TGCTTTTTTT TTTTATTTTG 002160
002161 TACCCCATCA ATAAAATGAT TTTCAGCATG TATCCCCAAA TAAACAATAT TTTATTTATT GATTGATTGA TAAACAGACA 002240
002241 TGTTTAATGA TAGCTTGCTT TTCACAGAGG TGACTTCGGA GACTTCTAAT CTATAATCCA GGAGTATATA ACCATGCAGC 002320
002321 ACAGACCAAT TAGTCACATG TAAAATAAAC TAGATTCTTA CCAC
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