ENST00000538573.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000538573.1 |
Source |
Gencode19 |
Same with |
lnc-DYRK2-1:1,NONHSAT029257 |
Classification |
intergenic |
Length |
559 nt |
Genomic location |
chr12+:67913609..67942943 |
Exon number |
3 |
Exons |
67913609..67913718,67935907..67936314,67942903..67942943 |
Genome context |
|
Sequence |
000001 TGAGCAGATT GATGTATCTG TTTAGACTGG TTGCCTTTAG GGCTCTCTGG GAACCTGGTC TGACTTTCTA GTGCCCAGGC 000080
000081 AGGCACTGCC CCAGATCACT GCATATATAG CCTCAACACT GTGTCTGGCA TCCATGGACA ATTCATTTTG CTCAATTGAA 000160 000161 CTGAATGCTC AAGATCCTCA AGAAAGGAAG AAGAGAAATT ACATTTACAA AGCACCTATT GTGTGCCAAT CACTATAGTA 000240 000241 GGCCACTTTA TGTTTTATTA AACTAAATCC CTTGAGCTAG AGTCAGCTGC AAGGGAAGAT GATGACCACT ATTTTACTGA 000320 000321 TGAAGAAACT AGACTCCCTC CCTCAGAGGT TGAGGAGTGT GCTAGAAGTC ACACAACCAC CAAATGGCAA TATTAAATTC 000400 000401 AAACCTGGTG ACTCCAAAGG CTATACTCTC CACATCATAA CAGAGCCTCC AAGTCTGGTT GTAAGAAAGC ATCAGATAGC 000480 000481 AGGCATCCAT TTCTTCATGC GTTCTTCAGT TCATGTAGAT TTTGTACCAT AGAAAAAAAG GCTTTACCCA CTCAAACAT |
Predicted Small Protein
Name | ENST00000538573.1_smProtein_164:265 |
Length | 34 |
Molecular weight | 3970.7974 |
Aromaticity | 0.0909090909091 |
Instability index | 57.1636363636 |
Isoelectric point | 10.2977905273 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0468746056982 |
Amino acid sequence | MLKILKKGRREITFTKHLLCANHYSRPLYVLLN |
Secondary structure | LHHHHHLLLLHHHHHHHHHHHLLLLLLEEEELL |
PRMN | - |
PiMo | - |