ENST00000569215.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000569215.1

Source

Gencode19

Same with

lnc-GRIN2A-2:1

Classification

intergenic

Length

1313 nt

Genomic location

chr16-:10445297..10446609

Exon number

1

Exons

10445297..10446609

Genome context

Sequence
000001 GGCTGAAGCA GGAGAATCGC TTGAACCCGG GAAAGGGAGA TTGCAGTAAA CCAAGATCGT ACCACCACAC TCCAGCTTGG 000080
000081 ATGACAGAGC GAGACTCTGT CTCAAAAAAA AAAAAAAAAT TCATGTGACA ATTGTATGAT TCCACTTATA TGAGGTACTT 000160
000161 AGAATAGTTA AATTCACAGA GACAGAAAGT AGAACAGTGG TTATCAGAGG CCAAGGGGAT GGAGGAGCTG CTCACGGCGA 000240
000241 GTTATTGCTT CAAGGGTACA GAGTTTCAGT TTGGGATGAT AAAAAATTCT GGAGCTGGTT GGGAGTGATG ATTGCACAAC 000320
000321 AGTGTGAATG TACTTAATGC CACTGAACTG TACACCTAAA ATGGTTAAAC AGTAAATTTT ATGTCAAATA TATTTTACCA 000400
000401 TAATAACATT TTTAAAAATT GATGGGAAAT ATTATTTTGC AATGGAATAG TTGCAAGTTG TTTGTTAATT GTTCAAACCA 000480
000481 CCTTGGTACT TGCTCATTTG GTTGAGGGAG ATTAGAGGGA AGAAATTGCA AAAGATGTTT TGCTAGTGTG TACTACAAGA 000560
000561 TTTCAGATGA CTTGTTGCCT GGTATAGTAG CTGCACTTCT TTAAACTTTG CTATACTGTA TATACAGCCA GGAATGTTTT 000640
000641 TCTCAAGGAC ATGGCAGCTA CCTCTTTGAA ATAAAATCTT CAAGGGAGAT AGTTTTCCTA ACTCTTACTT TTGTGGGAGG 000720
000721 GTAGGAGTCT AACTTCAGTG GGTATCTTGC TCCAAGCTGC AAAACTGCCT CCTGTCTTAG AGATATGAAA CATCTGTTTC 000800
000801 TTCTTTGGAT AAAGCCAACT AGCAAACAAA GACCACCCCC AATTAACAGA TACATTTAAG ATGGACTATA TGTGATGAAT 000880
000881 GATGCTGTCA ACTCCTCTTA CTTGGGGACA AGTTATCATT TATCATAAGA ATATGTATGT CATAGATTGC ATCTGCTTGA 000960
000961 CATCACAAAA TATACCAGGA AAAAAGGGTG AAATGTATCC CTTTCTTGGT TGGGTGCGGT GGCTCATGCC TGTAATCCCA 001040
001041 GCACTTTGGG AGGCAAAGGT GGGTGGATCA CCTGAGCCCA GGAGTTCCAG ACCAGCCTGG GCAATATGGT GAGACCCCCC 001120
001121 ACCGTCTCTA CAAAAAATAC AAAAATTAGC TGGGTGTGAT GGCATGTCCC CTGCACTCCC AGCTCCTTGG GAGGCTGAGG 001200
001201 TAGGAGGATG GATTGAGCCT GAGAGGTCAA GACTGCGGTG AGCTATGTGA TTGTACCACT GCATTCCAGC CTGGGTGACA 001280
001281 GAGTGAGACC CTTTCTCAAA AAAAAAAAAA AAA
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Predicted Small Protein

Name ENST00000569215.1_smProtein_878:1111
Length 78
Molecular weight 8848.4555
Aromaticity 0.12987012987
Instability index 72.8961038961
Isoelectric point 9.13824462891
Runs 9
Runs residual 0.0191981931112
Runs probability 0.0371940568019
Amino acid sequence MMLSTPLTWGQVIIYHKNMYVIDCICLTSQNIPGKKGEMYPFLGWVRWLMPVIPALWEAK
VGGSPEPRSSRPAWAIW
Secondary structure LLLLLLLLLLEEEEEELLLEEEEEEEELLLLLLLLLLLLLLLLHHHHHHHHLHHHHHHHH
LLLLLLLLLLLLLLLLL
PRMN -
PiMo -