ENST00000583343.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000583343.1

Source

Gencode19

Same with

lnc-C17orf48-2:2,NONHSAT145641

Classification

antisense

Length

876 nt

Genomic location

chr17+:10633108..10672323

Exon number

5

Exons

10633108..10633217,10639922..10639955,10657546..10657679,10671182..10671361,10671906..10672323

Genome context

Sequence
000001 CCGCCAGCGC GAAGAAGGCG GCCATGAGTC CGTTGCAGGC CCGCCACAGC GCTGGCGCCA TGGCTCGGAG AACACGGCGC 000080
000081 GGGGCGGTGA GTCCTGCCAC GTGCGGGGCG CACCTGACAT ACCTGGATAT AAACAATATC CAAGGCCCCT AAGGTAAAAG 000160
000161 CCTTGCTCCA AGTCCCCTTC TGACTTCTAG TCACTTCCGT GCTGCCAGCA GAGGGCGTGG GATTCTTCCT GAGGAGCCTG 000240
000241 AGTCTCAGCT TTGCCAGGTC CTTGCTGTGT GACCTTGGCT CCTGTGGGGC TATTGCAGAG GAGAAACTTC TGGAACAGAG 000320
000321 AGCTCCTTGT CCAGGGATGC TGCATCTGGG TGAGCTGCTC CTTGGATATG GTGCAAGTGT GGCCAGGGTG TGGTGTGGAA 000400
000401 GGAGCAGAAG TCTTCAGGAC TGAATCTGGA TGGACCACTG TGACAGCTGT ATACCCAGAT TATATTTCCC AGAAAGTGCC 000480
000481 TGCAACAATA CTTCCAGTCC CATATGTGCT TCTAGAGCCG GTCACTCTCT CAGTTTAAAG GTGGAGTCTA TTTCCCTTCC 000560
000561 CCTTAAGACT GCCTCAGTGG TTAGACTATG GCAAGAAAGA TATCATGTGA CTTCCAAGAC AAATCCTAAA AGGCAACACA 000640
000641 GCTTCCACCT GGCTCTTTCT ATTTTGAGCC ACTTACCTAT GGAACACCAG CCACCATGTT GGAAGGAAGC CCAGGTGACA 000720
000721 TGGAGAAGCA TCTGTGAGTG CTCTGGCAGG CACGCCAGCT TGAATCTCAG CCATCAGCCA GCATCAACCA CCAGATGCGT 000800
000801 GAGAGAGAGC CTTCACATGA CTTCAGGCCT CAGCCTGCAA GCTGTCCCAG CTTATGCTGA GTGAGCACAG ACAACC
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Predicted Small Protein

Name ENST00000583343.1_smProtein_23:151
Length 43
Molecular weight 4448.0402
Aromaticity 0.0238095238095
Instability index 88.65
Isoelectric point 11.4196166992
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0454614278143
Amino acid sequence MSPLQARHSAGAMARRTRRGAVSPATCGAHLTYLDINNIQGP
Secondary structure LLHHHHLLLHHHHHHHHHLLLLLLLLLLLLEEEELLLLLLLL
PRMN -
PiMo -